RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 CINPQ9BW66 212 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-204ENST00000563130 KCNF1Q9H3M0 494 aa6.26□□□□□ -1.41
CNOT1-204ENST00000563130 ZDHHC6Q9H6R6 413 aa6.26□□□□□ -1.41
CNOT1-204ENST00000563130 ZFAND3Q9H8U3 227 aa6.26□□□□□ -1.41
CNOT1-204ENST00000563130 EBF2Q9HAK2 575 aa6.26□□□□□ -1.41
CNOT1-204ENST00000563130 ATP13A2Q9NQ11 1180 aa6.26□□□□□ -1.41
CNOT1-204ENST00000563130 VPS45Q9NRW7 570 aa6.26□□□□□ -1.41
CNOT1-204ENST00000563130 AMACRQ9UHK6 382 aa6.26□□□□□ -1.41
CNOT1-204ENST00000563130 AMFRQ9UKV5 643 aa6.26□□□□□ -1.41
CNOT1-204ENST00000563130 TPX2Q9ULW0 747 aaKnown RBP6.26□□□□□ -1.41
CNOT1-204ENST00000563130 CEP192Q8TEP8 1941 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 LRRC72A6NJI9 287 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 C16orf96A6NNT2 1141 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 MIF4GDA9UHW6 222 aaKnown RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 ERVH48-1M5A8F1 160 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TRAFD1O14545 582 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 AREL1O15033 823 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 DDX3YO15523 660 aaKnown RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SPINT1O43278 529 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 AP1G1O43747 822 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 NRDCO43847 1150 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 GJB3O75712 270 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PYGMP11217 842 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TGM2P21980 687 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 MAOBP27338 520 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 MMP13P45452 471 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 MAPK8P45983 427 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CCR5P51681 352 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 NEK3P51956 506 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 RWDD2BP57060 319 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 AP1S1P61966 158 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PPP2CBP62714 309 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PPP2CAP67775 309 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 RALGPS1Q5JS13 557 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SYCP2LQ5T4T6 812 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 KIAA0895LQ68EN5 471 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 NEK5Q6P3R8 708 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 NPNTQ6UXI9 565 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 BBS12Q6ZW61 710 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SRLQ86TD4 932 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TRIM69Q86WT6 500 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 RFX6Q8HWS3 928 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CCDC13Q8IYE1 715 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 RYBPQ8N488 228 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 GANCQ8TET4 914 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PIGKQ92643 395 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 RAB7BQ96AH8 199 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 MRRFQ96E11 262 aaKnown RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 KLHL32Q96NJ5 620 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 LGMNQ99538 433 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 IL12RB2Q99665 862 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 MAK16Q9BXY0 300 aaKnown RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 BRD8Q9H0E9 1235 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CAPN10Q9HC96 672 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PREBQ9HCU5 417 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 EIF2B4Q9UI10 523 aaKnown RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 GUCA1BQ9UMX6 200 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PPP2R2CQ9Y2T4 447 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 HEY1Q9Y5J3 304 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SLCO1B1Q9Y6L6 691 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 ZNF292O60281 2723 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 DNAH14Q0VDD8 3507 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3DA0A087WVF3 549 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3IA0A087WXS9 549 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3EA0A087X179 549 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3KA0A087X1G2 549 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 A0A1W2PPC4 97 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3FA6NER0 549 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PATE3B3GLJ2 98 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3LB9A6J9 549 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 HTRA2O43464 458 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 FOXD2O60548 495 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PIGNO95427 931 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 FTCDO95954 541 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3HP0C7X1 549 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CCNB1P14635 433 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PECAM1P16284 738 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CD27P26842 260 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 SCNN1BP51168 640 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 DYNLT1P63172 113 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 IFI35P80217 286 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 ZNF235Q14590 738 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 IHHQ14623 411 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PDK1Q15118 436 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 LLGL1Q15334 1064 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CCDC6Q16204 474 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 ODF2Q5BJF6 829 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3GQ6DHY5 549 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3CQ6IPX1 549 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 FBXL19Q6PCT2 694 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 PRR23CQ6ZRP0 262 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 ZSWIM9Q86XI8 627 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CAMK1DQ8IU85 385 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 TBC1D3Q8IZP1 549 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 BBS5Q8N3I7 341 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 CNTD1Q8N815 330 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 NSMCE1Q8WV22 266 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 GLMNQ92990 594 aa6.25□□□□□ -1.41
CNOT1-204ENST00000563130 ZNF830Q96NB3 372 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-204ENST00000563130 NUDCD1Q96RS6 583 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms