RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 NME3Q13232 169 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 HLTFQ14527 1009 aaKnown RBP eCLIP8.42□□□□□ -1.06
CKLF-208ENST00000563092 NR1D2Q14995 579 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 SKIDA1Q1XH10 827 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 KCTD16Q68DU8 428 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 C11orf57Q6ZUT1 292 aaPredicted RBP8.42□□□□□ -1.06
CKLF-208ENST00000563092 FAM183BPQ6ZVS7 135 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 ZNF438Q7Z4V0 828 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 TFAP2DQ7Z6R9 452 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 VPS36Q86VN1 386 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 C17orf82Q86X59 251 aaPredicted RBP8.42□□□□□ -1.06
CKLF-208ENST00000563092 PTRH1Q86Y79 214 aaKnown RBP8.42□□□□□ -1.06
CKLF-208ENST00000563092 ARHGEF2Q92974 986 aaKnown RBP8.42□□□□□ -1.06
CKLF-208ENST00000563092 SNX21Q969T3 373 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 GSDMAQ96QA5 445 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 CMKLR1Q99788 373 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 TSG101Q99816 390 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 OSBPL1AQ9BXW6 950 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 SLC6A16Q9GZN6 736 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 TKTL2Q9H0I9 626 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 CDH19Q9H159 772 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 WDCPQ9H6R7 721 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 RRN3Q9NYV6 651 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 MPP6Q9NZW5 540 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 COX16Q9P0S2 106 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 HECAQ9UBI9 543 aaPredicted RBP8.42□□□□□ -1.06
CKLF-208ENST00000563092 GULP1Q9UBP9 304 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 GPR34Q9UPC5 381 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 FCF1Q9Y324 198 aaKnown RBP8.42□□□□□ -1.06
CKLF-208ENST00000563092 PCDHB11Q9Y5F2 797 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 SNX10Q9Y5X0 201 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 DGKBQ9Y6T7 804 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 RNF215Q9Y6U7 377 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 LRP4O75096 1905 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 ITPR2Q14571 2701 aa8.42□□□□□ -1.06
CKLF-208ENST00000563092 STMND1H3BQB6 276 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 NUDT21O43809 227 aaKnown RBP8.41□□□□□ -1.06
CKLF-208ENST00000563092 GRAP2O75791 330 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 TM7SF2O76062 418 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 RASGRP1O95267 797 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 ERBB2P04626 1255 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 GNA15P30679 374 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 GKP32189 559 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 MARSP56192 900 aaKnown RBP8.41□□□□□ -1.06
CKLF-208ENST00000563092 SLC6A3Q01959 620 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 GNA12Q03113 381 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 CETN1Q12798 172 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 NFATC4Q14934 902 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 C16orf72Q14CZ0 275 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 IRF4Q15306 451 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 CLPPQ16740 277 aaPredicted RBP8.41□□□□□ -1.06
CKLF-208ENST00000563092 WSCD2Q2TBF2 565 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 MYLK3Q32MK0 819 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 TMEM52BQ4KMG9 183 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 C4orf17Q53FE4 359 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 EFHC2Q5JST6 749 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 MANEALQ5VSG8 457 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 LRRC31Q6UY01 552 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 ENOSF1Q7L5Y1 443 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 GKN2Q86XP6 184 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 TRIM59Q8IWR1 403 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 OR2AP1Q8NGE2 309 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 GPBAR1Q8TDU6 330 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 TSACCQ96A04 125 aaPredicted RBP8.41□□□□□ -1.06
CKLF-208ENST00000563092 MIB2Q96AX9 1013 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 HAPLN3Q96S86 360 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 C1QTNF7Q9BXJ2 289 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 SPRY4Q9C004 299 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 SEMA6CQ9H3T2 930 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 RETREG1Q9H6L5 497 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 ZDHHC6Q9H6R6 413 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 SYNDIG1Q9H7V2 258 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 ATP13A1Q9HD20 1204 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 TMPRSS4Q9NRS4 437 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 RMND1Q9NWS8 449 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 SIRPGQ9P1W8 387 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 PPARGC1AQ9UBK2 798 aaKnown RBP8.41□□□□□ -1.06
CKLF-208ENST00000563092 DKK3Q9UBP4 350 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 MFHAS1Q9Y4C4 1052 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 ACTL7AQ9Y615 435 aa8.41□□□□□ -1.06
CKLF-208ENST00000563092 ANKRD17O75179 2603 aaKnown RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 NEMP1O14524 444 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 HGSO14964 777 aaPredicted RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 THAP12O43422 761 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 B4GAT1O43505 415 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 MMP20O60882 483 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 POP4O95707 220 aaKnown RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 F9P00740 461 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 FGF3P11487 239 aaPredicted RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 CCL4P13236 92 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 KRT5P13647 590 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 TIMP2P16035 220 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 SCNN1AP37088 669 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 SUOXP51687 545 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 SRP54P61011 504 aaKnown RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 NRG1Q02297 640 aaPredicted RBP8.4□□□□□ -1.06
CKLF-208ENST00000563092 SQSTM1Q13501 440 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 PNOCQ13519 176 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 KLHL40Q2TBA0 621 aa8.4□□□□□ -1.06
CKLF-208ENST00000563092 SLC25A52Q3SY17 297 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms