RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ELOCQ15369 112 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 ERAP2Q6P179 960 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 IGF2-ASQ6U949 168 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 PYROXD2Q8N2H3 581 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 FSTL5Q8N475 847 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-202ENST00000562722 PAF1Q8N7H5 531 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 ARL10Q8N8L6 244 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 RTL3Q8N8U3 475 aaKnown RBP13.13□□□□□ -0.31
SF3B3-202ENST00000562722 TP53I13Q8NBR0 393 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-202ENST00000562722 PCDH19Q8TAB3 1148 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 CENPIQ92674 756 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-202ENST00000562722 NTAN1Q96AB6 310 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 HMCESQ96FZ2 354 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 TBATAQ96M53 351 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 CLPBQ9H078 707 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 EPB41L5Q9HCM4 733 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 PNMA8BQ9ULN7 279 aaPredicted RBP13.13□□□□□ -0.31
SF3B3-202ENST00000562722 COQ6Q9Y2Z9 468 aa13.13□□□□□ -0.31
SF3B3-202ENST00000562722 CCDC187A0A096LP49 1063 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 RASA4BC9J798 803 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 CASC3O15234 703 aaKnown RBP13.12□□□□□ -0.31
SF3B3-202ENST00000562722 INSIG1O15503 277 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 RASA4O43374 803 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 RASGRP1O95267 797 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 PIGNO95427 931 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 PCCBP05166 539 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 CELA2BP08218 269 aaPredicted RBP13.12□□□□□ -0.31
SF3B3-202ENST00000562722 ALPIP09923 528 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 DESP17661 470 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 SUOXP51687 545 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 LY6DQ14210 128 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 INO80DQ53TQ3 878 aaPredicted RBP13.12□□□□□ -0.31
SF3B3-202ENST00000562722 DNAJC24Q6P3W2 148 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 WDR59Q6PJI9 974 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 ENPP7Q6UWV6 458 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 CCDC81Q6ZN84 652 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 KYQ8NBH2 561 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 TSACCQ96A04 125 aaPredicted RBP13.12□□□□□ -0.31
SF3B3-202ENST00000562722 CCDC74AQ96AQ1 378 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 WBP1Q96G27 269 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 KLC2Q9H0B6 622 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 DKK3Q9UBP4 350 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 GPR34Q9UPC5 381 aa13.12□□□□□ -0.31
SF3B3-202ENST00000562722 TMEM110-MUSTN1A8MSY1 372 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 CCP110O43303 1012 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 RPLP0P05388 317 aaKnown RBP13.11□□□□□ -0.31
SF3B3-202ENST00000562722 C6P13671 934 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 HK3P52790 923 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 JAM2P57087 298 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 YBEYP58557 167 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-202ENST00000562722 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 ALG11Q2TAA5 492 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 PARP15Q460N3 678 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 TMEM52BQ4KMG9 183 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 KIAA1614Q5VZ46 1190 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 GKN2Q86XP6 184 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 DNAAF5Q86Y56 855 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 C3orf20Q8ND61 904 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 ATL2Q8NHH9 583 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 VOPP1Q96AW1 172 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 PRR11Q96HE9 360 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-202ENST00000562722 MCEEQ96PE7 176 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 GFM1Q96RP9 751 aaKnown RBP13.11□□□□□ -0.31
SF3B3-202ENST00000562722 PCDHB18PQ96TA0 734 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 EDEM3Q9BZQ6 932 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 STRADBQ9C0K7 418 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 NOL6Q9H6R4 1146 aaKnown RBP13.11□□□□□ -0.31
SF3B3-202ENST00000562722 PCDH12Q9NPG4 1184 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 LHX3Q9UBR4 397 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 UBA2Q9UBT2 640 aaPredicted RBP13.11□□□□□ -0.31
SF3B3-202ENST00000562722 KLQ9UEF7 1012 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 MFHAS1Q9Y4C4 1052 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 DAAM1Q9Y4D1 1078 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 OR1A2Q9Y585 309 aa13.11□□□□□ -0.31
SF3B3-202ENST00000562722 CDRT15L2A8MXV6 281 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 J3QKU1 62 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 EPHB6O15197 1021 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 FGF10O15520 208 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-202ENST00000562722 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 UNGP13051 313 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-202ENST00000562722 MLLT3P42568 568 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-202ENST00000562722 PEX5P50542 639 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 ZNF143P52747 638 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-202ENST00000562722 PDX1P52945 283 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 TPI1P60174 286 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 SRP54P61011 504 aaKnown RBP13.1□□□□□ -0.31
SF3B3-202ENST00000562722 PTP4A2Q12974 167 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 SERINC3Q13530 473 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 INPP5AQ14642 412 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 NFATC4Q14934 902 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 KRT31Q15323 416 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 WSCD2Q2TBF2 565 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 CT47A1Q5JQC4 288 aaPredicted RBP13.1□□□□□ -0.31
SF3B3-202ENST00000562722 LVRNQ6Q4G3 990 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 SDR16C5Q8N3Y7 309 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 FBXO39Q8N4B4 442 aa13.1□□□□□ -0.31
SF3B3-202ENST00000562722 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms