RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 GKN1Q9NS71 199 aa12.74□□□□□ -0.37
AC055717.2-201ENST00000561864 ZNF358Q9NW07 568 aa12.74□□□□□ -0.37
AC055717.2-201ENST00000561864 DNAJC16Q9Y2G8 782 aa12.74□□□□□ -0.37
AC055717.2-201ENST00000561864 PTPRSQ13332 1948 aa12.74□□□□□ -0.37
AC055717.2-201ENST00000561864 ANAPC1Q9H1A4 1944 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 E2F8A0AVK6 867 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 GFRA2O00451 464 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 PHGDHO43175 533 aaKnown RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 ITM2AO43736 263 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 MGRN1O60291 552 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 TRIM13O60858 407 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 RPP40O75818 363 aaKnown RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 KLHL2O95198 593 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 CTSAP10619 480 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 PFKLP17858 780 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 CR2P20023 1033 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 OGNP20774 298 aaKnown RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 ITGB8P26012 769 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 TARSP26639 723 aaKnown RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 HNRNPH1P31943 449 aaKnown RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 SGSHP51688 502 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 AQP5P55064 265 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 KCNJ2P63252 427 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 PRAMEP78395 509 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 SMAD3P84022 425 aaKnown RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 ITGA9Q13797 1035 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 RALGPS1Q5JS13 557 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 RNF219Q5W0B1 726 aaPredicted RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 CXorf57Q6NSI4 855 aaKnown RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 LRRC8EQ6NSJ5 796 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 Q6ZNB5 142 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 CCDC149Q6ZUS6 474 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 NECAB2Q7Z6G3 386 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 TMCO2Q7Z6W1 182 aaPredicted RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 FIBCD1Q8N539 461 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 OR52K2Q8NGK3 314 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 GPR150Q8NGU9 434 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 BRSK1Q8TDC3 778 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 STYXQ8WUJ0 223 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 STON2Q8WXE9 905 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 NUDCD1Q96RS6 583 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 C20orf27Q9GZN8 174 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 MUC3BQ9H195 1237 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 TRPC7Q9HCX4 862 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 SCUBE2Q9NQ36 999 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 OXSMQ9NWU1 459 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 DNAJC28Q9NX36 388 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 LSM7Q9UK45 103 aaKnown RBP12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 SORCS3Q9UPU3 1222 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 ZNF510Q9Y2H8 683 aa12.73□□□□□ -0.37
AC055717.2-201ENST00000561864 INSIG1O15503 277 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 TSPAN3O60637 253 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 FGF18O76093 207 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 SNUPNO95149 360 aaKnown RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 LUC7L3O95232 432 aaKnown RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 CRTAMO95727 393 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 HSPA4LO95757 839 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 F7P08709 466 aaPredicted RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 T-ENOLP0DO92 83 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 MYL4P12829 197 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 SAT1P21673 171 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 PSMA3P25788 255 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 SLC26A3P40879 764 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 TAS2R39P59534 338 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 HTRA4P83105 476 aaPredicted RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 SLC20A2Q08357 652 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 CYTH1Q15438 398 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 SNCBQ16143 134 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 LIPMQ5VYY2 423 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 MRNIPQ6NTE8 343 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 CILP2Q8IUL8 1156 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 MFSD6LQ8IWD5 586 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 CENPLQ8N0S6 344 aaPredicted RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 GPATCH11Q8N954 259 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 TTC8Q8TAM2 541 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 KCTD4Q8WVF5 259 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 AUTS2Q8WXX7 1259 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 MRPS31Q92665 395 aaKnown RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 WBP2Q969T9 261 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 PTCD3Q96EY7 689 aaKnown RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 NSL1Q96IY1 281 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 SCYL1Q96KG9 808 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 GCNAQ96QF7 691 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 SORT1Q99523 831 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 TDRD1Q9BXT4 1180 aaKnown RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 ZNF395Q9H8N7 513 aaPredicted RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 FBXO6Q9NRD1 293 aaPredicted RBP12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 SMPD4Q9NXE4 827 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 HAO1Q9UJM8 370 aa12.72□□□□□ -0.37
AC055717.2-201ENST00000561864 TTC24A2A3L6 582 aaPredicted RBP12.71□□□□□ -0.37
AC055717.2-201ENST00000561864 TARM1B6A8C7 271 aa12.71□□□□□ -0.37
AC055717.2-201ENST00000561864 CBX4O00257 560 aa12.71□□□□□ -0.37
AC055717.2-201ENST00000561864 GREM1O60565 184 aa12.71□□□□□ -0.37
AC055717.2-201ENST00000561864 TBL1XO60907 577 aa12.71□□□□□ -0.37
AC055717.2-201ENST00000561864 LYPLA1O75608 230 aaPredicted RBP12.71□□□□□ -0.37
AC055717.2-201ENST00000561864 C1RP00736 705 aa12.71□□□□□ -0.37
AC055717.2-201ENST00000561864 LRG1P02750 347 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms