RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 RAD51CO43502 376 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SMAD6O43541 496 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 NARSO43776 548 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 RGS9O75916 674 aaPredicted RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SUN1O94901 812 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 KAT7O95251 611 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 MAP3K6O95382 1288 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SLU7O95391 586 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ECEL1O95672 775 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 EPOP01588 193 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 JCHAINP01591 159 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ATP5BP06576 529 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 MMP2P08253 660 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 DRD1P21728 446 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 GLDCP23378 1020 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 GRNP28799 593 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 RPL22P35268 128 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ATP5OP48047 213 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CDK16Q00536 496 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ECT2LQ008S8 904 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 PRKCQQ04759 706 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SLC10A7Q0GE19 358 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ZBTB17Q13105 803 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SEMA5AQ13591 1074 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SNX1Q13596 522 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CCINQ13939 588 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 TEAD4Q15561 434 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 PARP6Q2NL67 630 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 HSF5Q4G112 596 aaPredicted RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 FBXO43Q4G163 708 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 DGKKQ5KSL6 1271 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ANKRD20A2Q5SQ80 823 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ANKRD20A1Q5TYW2 823 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 MARC1Q5VT66 337 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ANKRD20A3Q5VUR7 823 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 KCTD11Q693B1 232 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 HEATR6Q6AI08 1181 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 IL31Q6EBC2 164 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 FSTL4Q6MZW2 842 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 DARS2Q6PI48 645 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 Q6ZS46 218 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ZC3H18Q86VM9 953 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 JAMLQ86YT9 394 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CCDC105Q8IYK2 499 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ZNF567Q8N184 647 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SYNPOQ8N3V7 929 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 PGBD5Q8N414 524 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SH2D3CQ8N5H7 860 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 NAT16Q8N8M0 369 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CCDC89Q8N998 374 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 FAM71DQ8N9W8 422 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 NETO2Q8NC67 525 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CCNYQ8ND76 341 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CCDC26Q8TAB7 109 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CCHCR1Q8TD31 782 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CSGALNACT1Q8TDX6 532 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 RUBCNQ92622 972 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 BHMTQ93088 406 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 IMP4Q96G21 291 aaKnown RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 NSMCE3Q96MG7 304 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 FCRL5Q96RD9 977 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 KRT12Q99456 494 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 P2RY13Q9BPV8 354 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 FAM118BQ9BPY3 351 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 GORASP1Q9BQQ3 440 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ERP44Q9BS26 406 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 LRRC1Q9BTT6 524 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SPON2Q9BUD6 331 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 OSBPL6Q9BZF3 934 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 MUC3BQ9H195 1237 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SLC25A51Q9H1U9 297 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 C10orf88Q9H8K7 445 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 GLOD4Q9HC38 313 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CD248Q9HCU0 757 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 CD320Q9NPF0 282 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 VPS45Q9NRW7 570 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 RBM22Q9NW64 420 aaKnown RBP eCLIP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 PAK5Q9P286 719 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 LHX3Q9UBR4 397 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 UBA2Q9UBT2 640 aaPredicted RBP5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SEPT3Q9UH03 358 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 SLCO3A1Q9UIG8 710 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 HPCAL4Q9UM19 191 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ERVW-1Q9UQF0 538 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 PIAS3Q9Y6X2 628 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 COL4A3Q01955 1670 aa5.55□□□□□ -1.52
ZEB1-220ENST00000560909 ZDBF2Q9HCK1 2354 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 HMX2A2RU54 273 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 ERI2A8K979 691 aaKnown RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 CHURC1-FNTBB4DL54 471 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 C10orf142B7Z368 130 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 K7ERQ8 282 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 CBX4O00257 560 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 DLL1O00548 723 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 KCNN4O15554 427 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 TTI1O43156 1089 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 HTRA2O43464 458 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 DEAF1O75398 565 aaPredicted RBP5.54□□□□□ -1.52
ZEB1-220ENST00000560909 TMCC1O94876 653 aa5.54□□□□□ -1.52
ZEB1-220ENST00000560909 METTL18O95568 372 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms