RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 MDM1Q8TC05 714 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 CPLX3Q8WVH0 158 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 ECHDC3Q96DC8 303 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 BTBD6Q96KE9 485 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 ETNK2Q9NVF9 386 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 PNMA8BQ9ULN7 279 aaPredicted RBP16.36■□□□□ 0.21
SPG21-211ENST00000560564 LUC7L2Q9Y383 392 aaKnown RBP16.36■□□□□ 0.21
SPG21-211ENST00000560564 PTPRQQ9UMZ3 2332 aa16.36■□□□□ 0.21
SPG21-211ENST00000560564 LY6G6EA0A0G2JKS1 128 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 DAPK3O43293 454 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 PEX11BO96011 259 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 RARAP10276 462 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 CASP14P31944 242 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 IL10RBQ08334 325 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 EIF2B5Q13144 721 aaKnown RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 PDE1CQ14123 709 aaPredicted RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 PIGHQ14442 188 aaPredicted RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 GRM3Q14832 879 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 UGP2Q16851 508 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 BOLA3Q53S33 107 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 ALKBH5Q6P6C2 394 aaKnown RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 CAMK1DQ8IU85 385 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 LZTR1Q8N653 840 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 TEKT4Q8WW24 435 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 RFFLQ8WZ73 363 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 ZNF641Q96N77 438 aaPredicted RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 CSPG4P5Q96PW8 444 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 PSKH2Q96QS6 385 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 TUBGCP5Q96RT8 1024 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.35■□□□□ 0.21
SPG21-211ENST00000560564 XPO4Q9C0E2 1151 aaKnown RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 CCDC86Q9H6F5 360 aaKnown RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 MBNL1Q9NR56 388 aaKnown RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 DNAJC28Q9NX36 388 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 IPO11Q9UI26 975 aaKnown RBP16.35■□□□□ 0.21
SPG21-211ENST00000560564 U3KQA8 63 aa16.35■□□□□ 0.21
SPG21-211ENST00000560564 TRABD2BA6NFA1 517 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 DFFAO00273 331 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 RIOK3O14730 519 aaKnown RBP16.34■□□□□ 0.21
SPG21-211ENST00000560564 SCAMP1O15126 338 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 PALMO75781 387 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 TM7SF2O76062 418 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 AMPD1P23109 780 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 MMP12P39900 470 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 HNRNPKP61978 463 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPG21-211ENST00000560564 NSUN2Q08J23 767 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPG21-211ENST00000560564 ELP6Q0PNE2 266 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 RFTN1Q14699 578 aaPredicted RBP16.34■□□□□ 0.21
SPG21-211ENST00000560564 BRAT1Q6PJG6 821 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 SRLQ86TD4 932 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 ZNF548Q8NEK5 533 aaPredicted RBP16.34■□□□□ 0.21
SPG21-211ENST00000560564 FAM71BQ8TC56 605 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 CXorf40AQ8TE69 158 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 WRAP53Q9BUR4 548 aaKnown RBP16.34■□□□□ 0.21
SPG21-211ENST00000560564 NUP85Q9BW27 656 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 SP110Q9HB58 689 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 PCDH18Q9HCL0 1135 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 PCDH12Q9NPG4 1184 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.34■□□□□ 0.21
SPG21-211ENST00000560564 NLGN3Q9NZ94 848 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 ANAPC7Q9UJX3 599 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 ADAMTS20P59510 1910 aa16.34■□□□□ 0.21
SPG21-211ENST00000560564 IGSF10Q6WRI0 2623 aa16.33■□□□□ 0.21
SPG21-211ENST00000560564 H3BRJ5 948 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
SPG21-211ENST00000560564 FFAR2O15552 330 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 NEBLO76041 1014 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 CR2P20023 1033 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 IL4RP24394 825 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 SLC10A7Q0GE19 358 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 AGERQ15109 404 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 HES3Q5TGS1 186 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 CPNE8Q86YQ8 564 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 FAM181AQ8N9Y4 354 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 SPOCK2Q92563 424 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 HSPH1Q92598 858 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 TCEAL2Q9H3H9 227 aaPredicted RBP16.33■□□□□ 0.2
SPG21-211ENST00000560564 ATP13A3Q9H7F0 1226 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 IP6K2Q9UHH9 426 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 ATP8A1Q9Y2Q0 1164 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 COQ6Q9Y2Z9 468 aa16.33■□□□□ 0.2
SPG21-211ENST00000560564 ARHGEF17Q96PE2 2063 aaPredicted RBP16.33■□□□□ 0.2
SPG21-211ENST00000560564 K7ESM1 405 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 MAFKO60675 156 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 CKMT1AP12532 417 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 C6P13671 934 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 SERPINA4P29622 427 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 ARL4AP40617 200 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 ARSEP51690 589 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 YPEL5P62699 121 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 INSM1Q01101 510 aaPredicted RBP16.32■□□□□ 0.2
SPG21-211ENST00000560564 RALGDSQ12967 914 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 IRF4Q15306 451 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 ASTE1Q2TB18 679 aaPredicted RBP16.32■□□□□ 0.2
SPG21-211ENST00000560564 WSCD2Q2TBF2 565 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 CCDC122Q5T0U0 273 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 TMCO4Q5TGY1 634 aa16.32■□□□□ 0.2
SPG21-211ENST00000560564 RBFAQ8N0V3 343 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms