RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 MAFFQ9ULX9 164 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 RUVBL2Q9Y230 463 aaKnown RBP9.79□□□□□ -0.84
RTF1-206ENST00000560447 L3MBTL1Q9Y468 752 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 KIAA1671Q9BY89 1806 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 GBF1Q92538 1859 aa9.79□□□□□ -0.84
RTF1-206ENST00000560447 SLC12A8A0AV02 714 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 SLC38A8A6NNN8 435 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 PRR5-ARHGAP8B1AHC4 643 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ACSL4O60488 711 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 CCNT2O60583 730 aaKnown RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 TLR5O60602 858 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 DIAPH2O60879 1101 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 LYPLA1O75608 230 aaPredicted RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 PSMG1O95456 288 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 EFEMP2O95967 443 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 CXCL10P02778 98 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 GALTP07902 379 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 MMP2P08253 660 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 GRK4P32298 578 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ATP5C1P36542 298 aaKnown RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 VHLP40337 213 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 SLC11A2P49281 568 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ALDH18A1P54886 795 aaKnown RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 CDH4P55283 916 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 USP46P62068 366 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ARHGAP8P85298 464 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 IRF9Q00978 393 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 PFKPQ01813 784 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 BTKQ06187 659 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 SLC34A1Q06495 639 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ACAP2Q15057 778 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 CNGA3Q16281 694 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 PSMD5Q16401 504 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 DEFB115Q30KQ5 88 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 MGAT5BQ3V5L5 792 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 SEL1L3Q68CR1 1132 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ZNF470Q6ECI4 717 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 FAM45BPQ6NSW5 357 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ZNF783Q6ZMS7 281 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 SLC41A1Q8IVJ1 513 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 MFN1Q8IWA4 741 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 FAM126BQ8IXS8 530 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 FSTL5Q8N475 847 aaPredicted RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 TDRD5Q8NAT2 981 aaKnown RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 ATAD1Q8NBU5 361 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ARRDC2Q8TBH0 407 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 FAM45AQ8TCE6 357 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 CD99L2Q8TCZ2 262 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ACTRT2Q8TDY3 377 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 PRR11Q96HE9 360 aaPredicted RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 ZNF419Q96HQ0 510 aaPredicted RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 SCYL1Q96KG9 808 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 CAPNS2Q96L46 248 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 RPRD1AQ96P16 312 aaPredicted RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 GPR78Q96P69 363 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ASB2Q96Q27 587 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 C19orf43Q9BQ61 176 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 RTKNQ9BST9 563 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 GPR62Q9BZJ7 368 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ZNF395Q9H8N7 513 aaPredicted RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 COG4Q9H9E3 785 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 PDFQ9HBH1 243 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 EML4Q9HC35 981 aaKnown RBP9.78□□□□□ -0.84
RTF1-206ENST00000560447 NT5MQ9NPB1 228 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 TCF7L2Q9NQB0 619 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ZNF358Q9NW07 568 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 IL1RAPL1Q9NZN1 696 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 ARMCX1Q9P291 453 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 MTRRQ9UBK8 725 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 DNMT3LQ9UJW3 386 aa9.78□□□□□ -0.84
RTF1-206ENST00000560447 C2orf71A6NGG8 1288 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 GPR37O15354 613 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 NBNO60934 754 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 CLDN11O75508 207 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 CNTN5O94779 1100 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 SERPINF2P08697 491 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 LTA4HP09960 611 aaKnown RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 SBK3P0C264 359 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 THRAP10827 490 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 ACADSP16219 412 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 GM2AP17900 193 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 IBSPP21815 317 aaPredicted RBP9.77□□□□□ -0.85
RTF1-206ENST00000560447 CPOXP36551 454 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 CD86P42081 329 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 GRIA4P48058 902 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 GPR15P49685 360 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 TAS2R39P59534 338 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 ACTR3P61158 418 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 MXRA7P84157 204 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 NFKB2Q00653 900 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 CAP1Q01518 475 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 SLC10A7Q0GE19 358 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 SEPT6Q14141 434 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 ZNF235Q14590 738 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 NAA25Q14CX7 972 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 DLG2Q15700 870 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 CCDC6Q16204 474 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 USP41Q3LFD5 358 aa9.77□□□□□ -0.85
RTF1-206ENST00000560447 ALFQ53S48 1182 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms