RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 C15orf59Q2T9L4 293 aaPredicted RBP11.28□□□□□ -0.6
LINC02253-202ENST00000560314 KLHL40Q2TBA0 621 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 CCDC14Q49A88 953 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 CRTC1Q6UUV9 634 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 XKR5Q6UX68 686 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 GKN2Q86XP6 184 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 RTL3Q8N8U3 475 aaKnown RBP11.28□□□□□ -0.6
LINC02253-202ENST00000560314 PCDH19Q8TAB3 1148 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 RXFP2Q8WXD0 754 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 CENPIQ92674 756 aaPredicted RBP11.28□□□□□ -0.6
LINC02253-202ENST00000560314 CPEB1Q9BZB8 566 aaKnown RBP11.28□□□□□ -0.6
LINC02253-202ENST00000560314 EDEM3Q9BZQ6 932 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 CLPBQ9H078 707 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 NOCTQ9UK39 431 aaKnown RBP11.28□□□□□ -0.6
LINC02253-202ENST00000560314 PNMA8BQ9ULN7 279 aaPredicted RBP11.28□□□□□ -0.6
LINC02253-202ENST00000560314 ANKRD36A6QL64 1941 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 MAST4O15021 2626 aa11.28□□□□□ -0.6
LINC02253-202ENST00000560314 TSPAN11A1L157 253 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 PES1O00541 588 aaKnown RBP11.27□□□□□ -0.61
LINC02253-202ENST00000560314 BUB1O43683 1085 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 MMP20O60882 483 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 CTSEP14091 401 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 XPAP23025 273 aaPredicted RBP11.27□□□□□ -0.61
LINC02253-202ENST00000560314 EEF1GP26641 437 aaKnown RBP11.27□□□□□ -0.61
LINC02253-202ENST00000560314 AIF1P55008 147 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 HDAC4P56524 1084 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 NFATC4Q14934 902 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 LRRC14Q15048 493 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 PARP15Q460N3 678 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 TMEM52BQ4KMG9 183 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 ATXN7L2Q5T6C5 722 aaPredicted RBP11.27□□□□□ -0.61
LINC02253-202ENST00000560314 FOXR1Q6PIV2 292 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 DNAAF5Q86Y56 855 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 KYQ8NBH2 561 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 FAM172AQ8WUF8 416 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 TMEM159Q96B96 161 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 TMEM74Q96NL1 305 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 GFM1Q96RP9 751 aaKnown RBP11.27□□□□□ -0.61
LINC02253-202ENST00000560314 NCAPGQ9BPX3 1015 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC02253-202ENST00000560314 SYNDIG1Q9H7V2 258 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 DONSONQ9NYP3 566 aa11.27□□□□□ -0.61
LINC02253-202ENST00000560314 WASH4PA8MWX3 477 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 FAM72CH0Y354 149 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 ITGB2P05107 769 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 EPHB2P29323 1055 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 HTR7P34969 479 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 NSFP46459 744 aaKnown RBP11.26□□□□□ -0.61
LINC02253-202ENST00000560314 INHBCP55103 352 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 FMO1Q01740 532 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 MTM1Q13496 603 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 ALG11Q2TAA5 492 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 DPCR1Q3MIW9 517 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 ZSCAN23Q3MJ62 389 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 CT47A1Q5JQC4 288 aaPredicted RBP11.26□□□□□ -0.61
LINC02253-202ENST00000560314 EFHC2Q5JST6 749 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 LRRC73Q5JTD7 316 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 FAM72AQ5TYM5 149 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 KIAA1614Q5VZ46 1190 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 FAM72DQ6L9T8 149 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 ERAP2Q6P179 960 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 BRAT1Q6PJG6 821 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 RAB11FIP2Q7L804 512 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 SLFN11Q7Z7L1 901 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 FAM72BQ86X60 149 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 FBXO39Q8N4B4 442 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 CCDC185Q8N715 623 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 C3orf20Q8ND61 904 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 GPT2Q8TD30 523 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 CCDC74AQ96AQ1 378 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 ZNF641Q96N77 438 aaPredicted RBP11.26□□□□□ -0.61
LINC02253-202ENST00000560314 TUBGCP5Q96RT8 1024 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 RBM15Q96T37 977 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC02253-202ENST00000560314 C11orf70Q9BRQ4 267 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 WRAP53Q9BUR4 548 aaKnown RBP11.26□□□□□ -0.61
LINC02253-202ENST00000560314 CLMPQ9H6B4 373 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 NOL6Q9H6R4 1146 aaKnown RBP11.26□□□□□ -0.61
LINC02253-202ENST00000560314 CATSPERBQ9H7T0 1116 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 EPB41L5Q9HCM4 733 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 MBNL1Q9NR56 388 aaKnown RBP11.26□□□□□ -0.61
LINC02253-202ENST00000560314 GULP1Q9UBP9 304 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 KLQ9UEF7 1012 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 GPR34Q9UPC5 381 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 DGKBQ9Y6T7 804 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
LINC02253-202ENST00000560314 PMS2P1A4D2B8 440 aa11.25□□□□□ -0.61
LINC02253-202ENST00000560314 CFAP69A5D8W1 941 aa11.25□□□□□ -0.61
LINC02253-202ENST00000560314 RASA4BC9J798 803 aa11.25□□□□□ -0.61
LINC02253-202ENST00000560314 FGF10O15520 208 aaPredicted RBP11.25□□□□□ -0.61
LINC02253-202ENST00000560314 RASA4O43374 803 aa11.25□□□□□ -0.61
LINC02253-202ENST00000560314 RPLP0P05388 317 aaKnown RBP11.25□□□□□ -0.61
LINC02253-202ENST00000560314 CALB1P05937 261 aa11.25□□□□□ -0.61
LINC02253-202ENST00000560314 CELA2BP08218 269 aaPredicted RBP11.25□□□□□ -0.61
LINC02253-202ENST00000560314 LIPCP11150 499 aa11.25□□□□□ -0.61
LINC02253-202ENST00000560314 KRT3P12035 628 aa11.25□□□□□ -0.61
LINC02253-202ENST00000560314 UNGP13051 313 aaPredicted RBP11.25□□□□□ -0.61
LINC02253-202ENST00000560314 TIMP2P16035 220 aa11.25□□□□□ -0.61
LINC02253-202ENST00000560314 PNLIPP16233 465 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms