RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PGBD5Q8N414 524 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 RAPGEF5Q92565 580 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 NUDCD1Q96RS6 583 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 CDC6Q99741 560 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 MGME1Q9BQP7 344 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 CINPQ9BW66 212 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-213ENST00000560175 ATP13A3Q9H7F0 1226 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 KLHL11Q9NVR0 708 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 TOR4AQ9NXH8 423 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 AMACRQ9UHK6 382 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 CA5BQ9Y2D0 317 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 BTBD3Q9Y2F9 522 aa13.34□□□□□ -0.27
SMAD3-213ENST00000560175 PTPRBP23467 1997 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.33□□□□□ -0.28
SMAD3-213ENST00000560175 SPAARA0A1B0GVQ0 90 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 MFSD11O43934 449 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 TRIM16O95361 564 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 THEGLP0DJG4 465 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 ITIH2P19823 946 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 CCNCP24863 283 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 EPHA8P29322 1005 aaPredicted RBP13.33□□□□□ -0.28
SMAD3-213ENST00000560175 SERPINA4P29622 427 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 GRK6P43250 576 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 SSR1P43307 286 aaKnown RBP13.33□□□□□ -0.28
SMAD3-213ENST00000560175 PFN3P60673 137 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 SIM1P81133 766 aaPredicted RBP13.33□□□□□ -0.28
SMAD3-213ENST00000560175 ELP6Q0PNE2 266 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 PRAMEF14Q5SWL7 426 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 SLC9A4Q6AI14 798 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 KYAT3Q6YP21 454 aaKnown RBP13.33□□□□□ -0.28
SMAD3-213ENST00000560175 TMTC1Q8IUR5 882 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 SLC22A18ASQ8N1D0 253 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 CBARPQ8N350 705 aaPredicted RBP13.33□□□□□ -0.28
SMAD3-213ENST00000560175 OR13H1Q8NG92 308 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 RHBDD1Q8TEB9 315 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 CALN1Q9BXU9 219 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 FZD3Q9NPG1 666 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 ITM2BQ9Y287 266 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 PPIL1Q9Y3C6 166 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 PCDHA13Q9Y5I0 950 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 EPN1Q9Y6I3 576 aaPredicted RBP13.33□□□□□ -0.28
SMAD3-213ENST00000560175 CHD8Q9HCK8 2581 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 CEP295Q9C0D2 2601 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 ASPMQ8IZT6 3477 aa13.33□□□□□ -0.28
SMAD3-213ENST00000560175 SPTY2D1-AS1A0A0U1RR47 76 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 A0A1W2PQ67 120 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 A6NNZ2 444 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 TOR1BO14657 336 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 MATN3O15232 486 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 SOCS5O75159 536 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 TM7SF2O76062 418 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 MMP12P39900 470 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 RABIFP47224 123 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 ARRB1P49407 418 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-213ENST00000560175 SCNN1BP51168 640 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 CLDN2P57739 230 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 POLR2LP62875 67 aaKnown RBP13.32□□□□□ -0.28
SMAD3-213ENST00000560175 BCL2L1Q07817 233 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 BNIP3Q12983 259 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 SGCGQ13326 291 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 IFI16Q16666 785 aaKnown RBP13.32□□□□□ -0.28
SMAD3-213ENST00000560175 MARC1Q5VT66 337 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 Q6ZSR6 202 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 RAB44Q7Z6P3 723 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-213ENST00000560175 SLCO6A1Q86UG4 719 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 ATPAF2Q8N5M1 289 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 PLD5Q8N7P1 536 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 TP53I13Q8NBR0 393 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-213ENST00000560175 SETD7Q8WTS6 366 aaKnown RBP13.32□□□□□ -0.28
SMAD3-213ENST00000560175 ADAMTS14Q8WXS8 1223 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 PCDH12Q9NPG4 1184 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 DTLQ9NZJ0 730 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 ANGPTL2Q9UKU9 493 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 PCDHB9Q9Y5E1 797 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 ALG6Q9Y672 507 aa13.32□□□□□ -0.28
SMAD3-213ENST00000560175 PLXNB3Q9ULL4 1909 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 KNTC1P50748 2209 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 BTNL10A8MVZ5 291 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 NEMP1O14524 444 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 FPGTO14772 594 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 MMP20O60882 483 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 NDUFA10O95299 355 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 GIMD1P0DJR0 217 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 CES1P23141 567 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 CDC25BP30305 580 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 CYLC1P35663 651 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-213ENST00000560175 MMP13P45452 471 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 YPEL5P62699 121 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 GBE1Q04446 702 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 RALGDSQ12967 914 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 FZD2Q14332 565 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 IHHQ14623 411 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 LRRC73Q5JTD7 316 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 TIGD7Q6NT04 549 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-213ENST00000560175 TMEM139Q8IV31 216 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 RHOT1Q8IXI2 618 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 BBS5Q8N3I7 341 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 SLC25A45Q8N413 288 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 HDAC11Q96DB2 347 aa13.31□□□□□ -0.28
SMAD3-213ENST00000560175 CALR3Q96L12 384 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms