RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 JAMLQ86YT9 394 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CDKL3Q8IVW4 592 aaPredicted RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 CCDC105Q8IYK2 499 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 UMODL1-AS1Q8N2C9 162 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PGBD5Q8N414 524 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 SLC44A3Q8N4M1 653 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ALLCQ8N6M5 410 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CEP112Q8N8E3 955 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 OR6K2Q8NGY2 324 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 EZH1Q92800 747 aaPredicted RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 ATP2A3Q93084 1043 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 NKD2Q969F2 451 aaPredicted RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 ALKBH8Q96BT7 664 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 ZBTB9Q96C00 473 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ALG14Q96F25 216 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 NSMCE3Q96MG7 304 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PWWP2AQ96N64 755 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PNKPQ96T60 521 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 DDX50Q9BQ39 737 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 TRMT61BQ9BVS5 477 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 NEUROG2Q9H2A3 272 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 TNKS2Q9H2K2 1166 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ANKZF1Q9H8Y5 726 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 SP110Q9HB58 689 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PDFQ9HBH1 243 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 USP29Q9HBJ7 922 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 FBRSL1Q9HCM7 1045 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 ATP13A1Q9HD20 1204 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 CD320Q9NPF0 282 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 HEBP1Q9NRV9 189 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 PIH1D1Q9NWS0 290 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 OBP2AQ9NY56 170 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 UBP1Q9NZI7 540 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 TBC1D14Q9P2M4 693 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 IPO11Q9UI26 975 aaKnown RBP5.31□□□□□ -1.56
SPG11-220ENST00000559933 VPS51Q9UID3 782 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 GGA2Q9UJY4 613 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 VPS28Q9UK41 221 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ZNF148Q9UQR1 794 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 EFR3BQ9Y2G0 817 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 ZNF510Q9Y2H8 683 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 TBC1D30Q9Y2I9 924 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 NEU2Q9Y3R4 380 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 OR51B4Q9Y5P0 310 aa5.31□□□□□ -1.56
SPG11-220ENST00000559933 BCLAF3A2AJT9 711 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 TYW5A2RUC4 315 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 ARHGAP42A6NI28 874 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PRR19A6NJB7 356 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 SHISA7A6NL88 538 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 LOC730098B7Z3J9 87 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 GOLGA8MH3BSY2 632 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PPP1R12AO14974 1030 aaPredicted RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 CHADO15335 359 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 INSIG1O15503 277 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 HOXC11O43248 304 aaPredicted RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 CACNG3O60359 315 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PRAMEF11O60813 436 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 BANF1O75531 89 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 ZMPSTE24O75844 475 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 TMCC1O94876 653 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 TMEM63AO94886 807 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 HEXIM1O94992 359 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 MED26O95402 600 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 METTL18O95568 372 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 NFATC1O95644 943 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 ECEL1O95672 775 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 JCHAINP01591 159 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 KRT14P02533 472 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 MYBL2P10244 700 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 HLA-EP13747 358 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 MAPK1P28482 360 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CHRNA3P32297 505 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 HTR7P34969 479 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 GJA4P35212 333 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 SERPINB6P35237 376 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 RPL22P35268 128 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 WASP42768 502 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 RPL21P46778 160 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 FNTAP49354 379 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 NDST2P52849 883 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 GP2P55259 537 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 OXCT1P55809 520 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 DSC2Q02487 901 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 GUCY2DQ02846 1103 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 ZP2Q05996 745 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PPIDQ08752 370 aaKnown RBP5.3□□□□□ -1.56
SPG11-220ENST00000559933 NIPAL4Q0D2K0 466 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 SPARCL1Q14515 664 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PDK1Q15118 436 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PON2Q15165 354 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PDGFRLQ15198 375 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PTPRRQ15256 657 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PPP1R7Q15435 360 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 CYTH1Q15438 398 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 ERCC6LQ2NKX8 1250 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 PLEKHG6Q3KR16 790 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 DGKKQ5KSL6 1271 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 EMC10Q5UCC4 262 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 MBLAC2Q68D91 279 aa5.3□□□□□ -1.56
SPG11-220ENST00000559933 HEATR6Q6AI08 1181 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms