RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZNF106Q9H2Y7 1883 aaKnown RBP10.99□□□□□ -0.65
TPM1-217ENST00000559108 GON4LQ3T8J9 2241 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 RALGAPA1Q6GYQ0 2036 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 CTAGE9A4FU28 777 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 C5orf60A6NFR6 353 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 A8MX80 341 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 UPK3BL1B0FP48 263 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 UPK3BL2E5RIL1 263 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 CES2O00748 559 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 RNASEH1O60930 286 aaKnown RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 PMPCBO75439 489 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 SEMA4FO95754 770 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 ITGAVP06756 1048 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 ALPIP09923 528 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 ATXN1LP0C7T5 689 aaKnown RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 ACADMP11310 421 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 PRLRP16471 622 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 CTPS1P17812 591 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 TCP1P17987 556 aaKnown RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 LHCGRP22888 699 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 MAOBP27338 520 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 SERPINA4P29622 427 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 NEK3P51956 506 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 NHLH1Q02575 133 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 RPL6Q02878 288 aaKnown RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 BCL2L1Q07817 233 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 BYSLQ13895 437 aaKnown RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 SIM2Q14190 667 aaPredicted RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 GALNT3Q14435 633 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 UGP2Q16851 508 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 TTC31Q49AM3 519 aaPredicted RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 USP39Q53GS9 565 aaKnown RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 SYCP2LQ5T4T6 812 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 FAM46CQ5VWP2 391 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 DRICH1Q6PGQ1 229 aaPredicted RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 RFLNAQ6ZTI6 216 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 BZW1Q7L1Q6 419 aaKnown RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 PID1Q7Z2X4 250 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 TSPAN33Q86UF1 283 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 TTC13Q8NBP0 860 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 OR14C36Q8NHC7 312 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 GANCQ8TET4 914 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 ATOH1Q92858 354 aaPredicted RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 KLK6Q92876 244 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 ZC3H10Q96K80 434 aaKnown RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 ZNF641Q96N77 438 aaPredicted RBP10.98□□□□□ -0.65
TPM1-217ENST00000559108 FCRL5Q96RD9 977 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 OSBPL1AQ9BXW6 950 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 ATP13A3Q9H7F0 1226 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 PCDH12Q9NPG4 1184 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 TMEM74BQ9NUR3 256 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 AMACRQ9UHK6 382 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 SPO11Q9Y5K1 396 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 SAR1BQ9Y6B6 198 aa10.98□□□□□ -0.65
TPM1-217ENST00000559108 LRP4O75096 1905 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 NPIPB15A6NHN6 443 aaPredicted RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 FAM47DPA6NHR8 397 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 RIOK3O14730 519 aaKnown RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 SOCS5O75159 536 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 USP12O75317 370 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 ZNF217O75362 1048 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 GCATO75600 419 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 ITPKAP23677 461 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 MAT2AP31153 395 aaKnown RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 RPL22P35268 128 aaKnown RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 ADRA1AP35348 466 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 MMP12P39900 470 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 SPARCL1Q14515 664 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 CCDC6Q16204 474 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 PCSK7Q16549 785 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 CDKN3Q16667 212 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 QPCTQ16769 361 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 TMEM259Q4ZIN3 620 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 RALGPS1Q5JS13 557 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 KCTD11Q693B1 232 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 LAYNQ6UX15 382 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 PRR23BQ6ZRT6 265 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 KDELC2Q7Z4H8 507 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 PELI3Q8N2H9 469 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 C1orf216Q8TAB5 229 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 PDCD6IPQ8WUM4 868 aaKnown RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 BIRC7Q96CA5 298 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 EID2BQ96D98 161 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 TRIM44Q96DX7 344 aaPredicted RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 HSPA12BQ96MM6 686 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 MCCC1Q96RQ3 725 aaPredicted RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 APOL2Q9BQE5 337 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 WRAP53Q9BUR4 548 aaKnown RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 BTBD1Q9H0C5 482 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 DDX47Q9H0S4 455 aaKnown RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 SMOC1Q9H4F8 434 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 B4GALT6Q9UBX8 382 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 RSPH14Q9UHP6 348 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 SCML1Q9UN30 329 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 SMG5Q9UPR3 1016 aaKnown RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 CA5BQ9Y2D0 317 aa10.97□□□□□ -0.65
TPM1-217ENST00000559108 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
TPM1-217ENST00000559108 PLXNB3Q9ULL4 1909 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms