RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PPP6CO00743 305 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 AHCYL1O43865 530 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 PLOD3O60568 738 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 SLC25A12O75746 678 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 CTSAP10619 480 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 TMEM11P17152 192 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 MAPK4P31152 587 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 RYKP34925 604 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 HDAC4P56524 1084 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 SNX16P57768 344 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 ZBED6P86452 979 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 FRG1Q14331 258 aaKnown RBP4.61□□□□□ -1.67
CASC4-206ENST00000558847 KRT24Q2M2I5 525 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 MIDNQ504T8 468 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 DCAF6Q58WW2 860 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 ENTPD8Q5MY95 495 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 C6orf10Q5SRN2 563 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 TMCO3Q6UWJ1 677 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 ENOSF1Q7L5Y1 443 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 SZRD1Q7Z422 152 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 GALNT5Q7Z7M9 940 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 DENND6AQ8IWF6 608 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 HACE1Q8IYU2 909 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 WDTC1Q8N5D0 677 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 MCPH1Q8NEM0 835 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 CMASQ8NFW8 434 aaPredicted RBP4.61□□□□□ -1.67
CASC4-206ENST00000558847 PSPC1Q8WXF1 523 aaKnown RBP4.61□□□□□ -1.67
CASC4-206ENST00000558847 ATOH1Q92858 354 aaPredicted RBP4.61□□□□□ -1.67
CASC4-206ENST00000558847 MOAP1Q96BY2 351 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 PERPQ96FX8 193 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 ZC3HAV1LQ96H79 300 aaKnown RBP4.61□□□□□ -1.67
CASC4-206ENST00000558847 TMEM68Q96MH6 324 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 TEX12Q9BXU0 123 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 CDT1Q9H211 546 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 WDR6Q9NNW5 1121 aaKnown RBP4.61□□□□□ -1.67
CASC4-206ENST00000558847 BPIFA1Q9NP55 256 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 SPAG4Q9NPE6 437 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 SLC6A13Q9NSD5 602 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 ANKEF1Q9NU02 776 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 KLHL13Q9P2N7 655 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 MKLN1Q9UL63 735 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 ADGRF5Q8IZF2 1346 aa4.61□□□□□ -1.67
CASC4-206ENST00000558847 TRBV5-3A0A0A0MS03 114 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 CDRT15L2A8MXV6 281 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 A8MZ25 164 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 SEC14L5O43304 696 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 LIASO43766 372 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 TOP3BO95985 862 aaKnown RBP4.6□□□□□ -1.67
CASC4-206ENST00000558847 KLKB1P03952 638 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 CD58P19256 250 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 ATP5F1P24539 256 aaPredicted RBP4.6□□□□□ -1.67
CASC4-206ENST00000558847 PIP4K2AP48426 406 aaPredicted RBP4.6□□□□□ -1.67
CASC4-206ENST00000558847 CDH8P55286 799 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 STK4Q13043 487 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 FAM133BQ5BKY9 247 aaKnown RBP4.6□□□□□ -1.67
CASC4-206ENST00000558847 ANKRD13BQ86YJ7 626 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.6□□□□□ -1.67
CASC4-206ENST00000558847 CADM3Q8N126 398 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 ZCCHC9Q8N567 271 aaKnown RBP4.6□□□□□ -1.67
CASC4-206ENST00000558847 LSMEM1Q8N8F7 131 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 RASSF8Q8NHQ8 419 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 SCARB1Q8WTV0 552 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 DDB2Q92466 427 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 FBXL8Q96CD0 374 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 HARBI1Q96MB7 349 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 SIGLEC11Q96RL6 698 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 PLEKHA4Q9H4M7 779 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 SCPEP1Q9HB40 452 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 THSD1Q9NS62 852 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 ANKRD10Q9NXR5 420 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 MORF4L1Q9UBU8 362 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 ADAM18Q9Y3Q7 739 aa4.6□□□□□ -1.67
CASC4-206ENST00000558847 ZNF644Q9H582 1327 aaPredicted RBP4.6□□□□□ -1.67
CASC4-206ENST00000558847 FRMD3A2A2Y4 597 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 DDTLA6NHG4 134 aaPredicted RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 NPIPB11E5RHQ5 1161 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 HCRTR2O43614 444 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 SLC25A17O43808 307 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 BCAR3O75815 825 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 SEC31AO94979 1220 aaKnown RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 CELA2AP08217 269 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 ACTN1P12814 892 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 RARGP13631 454 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 ZNF182P17025 639 aaPredicted RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 SAT1P21673 171 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 MCM3P25205 808 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 CHATP28329 748 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 HOXA13P31271 388 aaPredicted RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 ACTN2P35609 894 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 KRT20P35900 424 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 NNMTP40261 264 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 HADHAP40939 763 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 LMAN1P49257 510 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 ZNF81P51508 661 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 EFNA5P52803 228 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 LRMPQ12912 555 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 ITGADQ13349 1161 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 FGFBP1Q14512 234 aa4.59□□□□□ -1.67
CASC4-206ENST00000558847 DRAP1Q14919 205 aaPredicted RBP4.59□□□□□ -1.67
CASC4-206ENST00000558847 ADIPOQQ15848 244 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms