RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 GREB1Q4ZG55 1949 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 EIF4E1BA6NMX2 242 aaKnown RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 ZBTB14O43829 449 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 HNRNPLP14866 589 aaKnown RBP eCLIP10.64□□□□□ -0.715e-14■■□□□ 11.6
TPM1-210ENST00000558264 PSEN1P49768 467 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 CSRP3P50461 194 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 IL10RBQ08334 325 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 MSLNQ13421 630 aaPredicted RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 PDCD2Q16342 344 aaPredicted RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 TRIM60Q495X7 471 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 RALGPS1Q5JS13 557 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 LINGO4Q6UY18 593 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 TMC7Q7Z402 723 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 LRRC49Q8IUZ0 686 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 EXT2Q93063 718 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 GPR78Q96P69 363 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 CLSTN3Q9BQT9 956 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 UBE2OQ9C0C9 1292 aaKnown RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 ATP13A1Q9HD20 1204 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 NOP53Q9NZM5 478 aaKnown RBP10.64□□□□□ -0.71
TPM1-210ENST00000558264 ZDHHC2Q9UIJ5 367 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
TPM1-210ENST00000558264 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 ACSL4O60488 711 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 HNRNPCL1O60812 293 aaKnown RBP10.63□□□□□ -0.71
TPM1-210ENST00000558264 PRAMEF11O60813 436 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 ZDHHC11BP0C7U3 371 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TSPAN8P19075 237 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 KCNA5P22460 613 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 HOXD9P28356 352 aaPredicted RBP10.63□□□□□ -0.71
TPM1-210ENST00000558264 CDC25CP30307 473 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 CORO1AP31146 461 aaKnown RBP10.63□□□□□ -0.71
TPM1-210ENST00000558264 CA8P35219 290 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 SCNN1BP51168 640 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 ELAVL2Q12926 359 aaKnown RBP10.63□□□□□ -0.71
TPM1-210ENST00000558264 DBN1Q16643 649 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 PARP15Q460N3 678 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 WLSQ5T9L3 541 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 LIPMQ5VYY2 423 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TMEM198Q66K66 360 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TXNDC5Q8NBS9 432 aaKnown RBP10.63□□□□□ -0.71
TPM1-210ENST00000558264 STYXQ8WUJ0 223 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 ANKRD49Q8WVL7 239 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 FAM167BQ9BTA0 163 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TUBB6Q9BUF5 446 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 MRPL9Q9BYD2 267 aaKnown RBP10.63□□□□□ -0.71
TPM1-210ENST00000558264 POLR1EQ9GZS1 481 aaKnown RBP10.63□□□□□ -0.71
TPM1-210ENST00000558264 ZNF840PA6NDX5 716 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 CBX4O00257 560 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 LDB2O43679 373 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 CCDC166P0CW27 439 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TPBGLP0DKB5 382 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 SERPINB5P36952 375 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 CDKN2DP55273 166 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 GNA12Q03113 381 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TLE2Q04725 743 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 RCN1Q15293 331 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TAF12Q16514 161 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 USP41Q3LFD5 358 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TMCO4Q5TGY1 634 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 KIRREL3Q8IZU9 778 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 RYBPQ8N488 228 aaPredicted RBP10.63□□□□□ -0.71
TPM1-210ENST00000558264 TEX26Q8N6G2 289 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 PHF21BQ96EK2 531 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 POMKQ9H5K3 350 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 GPAMQ9HCL2 828 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 TRPC7Q9HCX4 862 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 PACSIN3Q9UKS6 424 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 ANKRD6Q9Y2G4 727 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 C15orf41Q9Y2V0 281 aa10.63□□□□□ -0.71
TPM1-210ENST00000558264 BMP1P13497 986 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 HMGA1P17096 107 aaKnown RBP10.62□□□□□ -0.71
TPM1-210ENST00000558264 RING1Q06587 406 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 CDK18Q07002 472 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 SEMA3AQ14563 771 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 SWT1Q5T5J6 900 aaKnown RBP10.62□□□□□ -0.71
TPM1-210ENST00000558264 NXNQ6DKJ4 435 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 SLC8B1Q6J4K2 584 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 CILP2Q8IUL8 1156 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 PDCD6IPQ8WUM4 868 aaKnown RBP10.62□□□□□ -0.71
TPM1-210ENST00000558264 PTCD2Q8WV60 388 aaKnown RBP10.62□□□□□ -0.71
TPM1-210ENST00000558264 SREK1Q8WXA9 508 aaKnown RBP10.62□□□□□ -0.71
TPM1-210ENST00000558264 IGSF21Q96ID5 467 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 PRKD2Q9BZL6 878 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 ILKAPQ9H0C8 392 aaPredicted RBP10.62□□□□□ -0.71
TPM1-210ENST00000558264 CWH43Q9H720 699 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 EBF2Q9HAK2 575 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 ARNT2Q9HBZ2 717 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 MRM3Q9HC36 420 aaKnown RBP10.62□□□□□ -0.71
TPM1-210ENST00000558264 VPS45Q9NRW7 570 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 IGSF5Q9NSI5 407 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 DNAJC28Q9NX36 388 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.62□□□□□ -0.713e-7■■□□□ 13.4
TPM1-210ENST00000558264 MTRRQ9UBK8 725 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 TARM1B6A8C7 271 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 HOXA2O43364 376 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 WFS1O76024 890 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 STC2O76061 302 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 PDE5AO76074 875 aa10.62□□□□□ -0.71
TPM1-210ENST00000558264 KLHL2O95198 593 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms