RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 TRIM7Q9C029 511 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 POFUT1Q9H488 388 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 SMYD3Q9H7B4 428 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 ZWILCHQ9H900 591 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 SAYSD1Q9NPB0 183 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 PLSCR4Q9NRQ2 329 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 TSPAN16Q9UKR8 245 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 DNPEPQ9ULA0 475 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 MAN2B2Q9Y2E5 1009 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 SNX9Q9Y5X1 595 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 RAD54BQ9Y620 910 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 FAM169AQ9Y6X4 670 aa7.36□□□□□ -1.23
MARK3-212ENST00000558223 POLR2AP24928 1970 aaKnown RBP7.36□□□□□ -1.23
MARK3-212ENST00000558223 BCLAF3A2AJT9 711 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 C3orf70A6NLC5 250 aaPredicted RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 AQP12BA6NM10 295 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 A8MXQ7 604 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 KPNA7A9QM74 516 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 HACD1B0YJ81 288 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 E7ESA3 106 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 MYO1CO00159 1063 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 DLL1O00548 723 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 TRDMT1O14717 391 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 TM4SF5O14894 197 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CLGNO14967 610 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CHADO15335 359 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 HUS1O60921 280 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 DUSP11O75319 330 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 FSBPO95073 299 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 ZNF286BP0CG31 522 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 GHRP10912 638 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 VAV1P15498 845 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 FGFR4P22455 802 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 WARSP23381 471 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 HOXC8P31273 242 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 RPL9P32969 192 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 LHX1P48742 406 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 POLD2P49005 469 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 HK3P52790 923 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CDH8P55286 799 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 EIF3EP60228 445 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 VAMP2P63027 116 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CDK16Q00536 496 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 IL9RQ01113 521 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 OGDHQ02218 1023 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 SOX4Q06945 474 aaPredicted RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 CDC16Q13042 620 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 EFR3AQ14156 821 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 KRT81Q14533 505 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 NOMO1Q15155 1222 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 RNASEH2BQ5TBB1 312 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 C9orf57Q5W0N0 161 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 KAZNQ674X7 775 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 MBLAC2Q68D91 279 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 SLC30A6Q6NXT4 461 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 DLK2Q6UY11 383 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CCDC121Q6ZUS5 278 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CEP68Q76N32 757 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 LIMS2Q7Z4I7 341 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 TLK2Q86UE8 772 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 RFX6Q8HWS3 928 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 GALNT13Q8IUC8 556 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CDKL3Q8IVW4 592 aaPredicted RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 CCDC197Q8NCU1 140 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 APPL2Q8NEU8 664 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 OR6B3Q8NGW1 331 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 ACTL9Q8TC94 416 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 ADAMTS15Q8TE58 950 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 UBASH3BQ8TF42 649 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 PYROXD1Q8WU10 500 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 SLC35F5Q8WV83 523 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 DYDC1Q8WWB3 177 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 RXFP2Q8WXD0 754 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 ATG4AQ8WYN0 398 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 C18orf25Q96B23 403 aaPredicted RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 RTP4Q96DX8 246 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 ASIC4Q96FT7 647 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CPB2Q96IY4 423 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 RNF157Q96PX1 679 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 SELENOSQ9BQE4 189 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 ADI1Q9BV57 179 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 SDCBP2Q9H190 292 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 PPANQ9NQ55 473 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 SETD4Q9NVD3 440 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 NINJ2Q9NZG7 142 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 TBC1D29Q9UFV1 150 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 CPA4Q9UI42 421 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 STAP1Q9ULZ2 295 aa7.35□□□□□ -1.23
MARK3-212ENST00000558223 R3HDM2Q9Y2K5 976 aaKnown RBP7.35□□□□□ -1.23
MARK3-212ENST00000558223 SF3B1O75533 1304 aaKnown RBP eCLIP7.34□□□□□ -1.232e-9■■■■■ 39.4
MARK3-212ENST00000558223 SMIM28A0A1B0GU29 152 aa7.34□□□□□ -1.23
MARK3-212ENST00000558223 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.34□□□□□ -1.23
MARK3-212ENST00000558223 EXOC1LA0A1B0GW35 172 aa7.34□□□□□ -1.23
MARK3-212ENST00000558223 PI4K2BG5E9Z4 385 aa7.34□□□□□ -1.23
MARK3-212ENST00000558223 H7C0S8 307 aa7.34□□□□□ -1.23
MARK3-212ENST00000558223 AP3B1O00203 1094 aa7.34□□□□□ -1.23
MARK3-212ENST00000558223 GNB5O14775 395 aa7.34□□□□□ -1.23
MARK3-212ENST00000558223 XPO1O14980 1071 aaKnown RBP7.34□□□□□ -1.23
MARK3-212ENST00000558223 TP73O15350 636 aa7.34□□□□□ -1.23
MARK3-212ENST00000558223 PRPF4O43172 522 aaKnown RBP eCLIP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms