RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 A0A1W2PQY0 241 aa13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 RPL4P36578 427 aaKnown RBP13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 VSTM1Q6UX27 236 aa13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 GRASPQ7Z6J2 395 aaPredicted RBP13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 TMEM132CQ8N3T6 1108 aa13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 PTPN18Q99952 460 aa13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 ARHGAP9Q9BRR9 750 aa13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 REXO4Q9GZR2 422 aaKnown RBP13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 RPRD1BQ9NQG5 326 aaKnown RBP13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 PHLPP1O60346 1717 aa13.77□□□□□ -0.2
SEMA6D-208ENST00000558014 MAGEC1O60732 1142 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 ALPPL2P10696 532 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 NUP107P57740 925 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 RRP1BQ14684 758 aaKnown RBP13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 C16orf72Q14CZ0 275 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 APTXQ7Z2E3 356 aaKnown RBP13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 OR4L1Q8NH43 312 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 SHC3Q92529 594 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 MCMBPQ9BTE3 642 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 TRMT61BQ9BVS5 477 aaKnown RBP13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 ELL3Q9HB65 397 aaPredicted RBP13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 SNX6Q9UNH7 406 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 RAI2Q9Y5P3 530 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 SGTAO43765 313 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 TRIM13O60858 407 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 IL5RAQ01344 420 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 MBTD1Q05BQ5 628 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 STX4Q12846 297 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 TCHHL1Q5QJ38 904 aaPredicted RBP13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 UBE2R2Q712K3 238 aaPredicted RBP13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 CYP4Z2PQ8N1L4 340 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 KLHL32Q96NJ5 620 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 EPN2O95208 641 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 TBX18O95935 607 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 KCNA5P22460 613 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 MCEMP1Q8IX19 187 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 STAG3L4Q8TBR4 150 aa13.77□□□□□ -0.21
SEMA6D-208ENST00000558014 FZD9O00144 591 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 CD3EAPO15446 510 aaKnown RBP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 PRNPP04156 253 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 TFEBP19484 476 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 WNT3AP56704 352 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 EPS8Q12929 822 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ACAP1Q15027 740 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 RASA2Q15283 850 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 TERF2Q15554 542 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 DGKKQ5KSL6 1271 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 LDB1Q86U70 411 aaPredicted RBP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 DNAJC19Q96DA6 116 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 AGXT2Q9BYV1 514 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 POLR1BQ9H9Y6 1135 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 VAV3Q9UKW4 847 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ZNF780BQ9Y6R6 833 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 GLYATL1P3A0A0U1RQE8 302 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 LTA4HP09960 611 aaKnown RBP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 RPL38P63173 70 aaKnown RBP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 PEX6Q13608 980 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 CASP12Q6UXS9 341 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 KRT77Q7Z794 578 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 TMPRSS11BQ86T26 416 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 AGGF1Q8N302 714 aaeCLIP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 MSL3Q8N5Y2 521 aaKnown RBP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ZNF563Q8TA94 476 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ZNF398Q8TD17 642 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 BADQ92934 168 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 AARSD1Q9BTE6 412 aaKnown RBP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ZNF232Q9UNY5 417 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 A0A087X1B8 175 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 WNT7AO00755 349 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 EIF3HO15372 352 aaKnown RBP eCLIP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 MATN4O95460 622 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 PAICSP22234 425 aaKnown RBP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 GNPDA1P46926 289 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ST3GAL1Q11201 340 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 MTAPQ13126 283 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 CCDC153Q494R4 210 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 RNASE11Q8TAA1 199 aaKnown RBP13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 SCAMP5Q8TAC9 235 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 KCTD4Q8WVF5 259 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ATL1Q8WXF7 558 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 GAL3ST4Q96RP7 486 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 S100A13Q99584 98 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 TXNRD2Q9NNW7 524 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 COMMD8Q9NX08 183 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 STK39Q9UEW8 545 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 FGRP09769 529 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 NR2F1P10589 423 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 OR4K2Q8NGD2 314 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 C1orf50Q9BV19 199 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 GKN1Q9NS71 199 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 NINJ2Q9NZG7 142 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ERVW-1Q9UQF0 538 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 KPNA5O15131 536 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 VPS4BO75351 444 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 CXCR3P49682 368 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 ZNF544Q6NX49 715 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 CNKSR3Q6P9H4 555 aa13.76□□□□□ -0.21
SEMA6D-208ENST00000558014 TMEM26Q6ZUK4 368 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms