RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 AP3B1O00203 1094 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 TSPAN6O43657 245 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 PLRG1O43660 514 aaKnown RBP14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 FZD6O60353 706 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 RNASEH2AO75792 299 aaKnown RBP14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 PGLSO95336 258 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 ADRB3P13945 408 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 NFKB1P19838 968 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 XPAP23025 273 aaPredicted RBP14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 CD68P34810 354 aaPredicted RBP14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 CD86P42081 329 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 GRIA4P48058 902 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 FNTBP49356 437 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 SKOR1P84550 965 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 CDK16Q00536 496 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 DSC2Q02487 901 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 NIPAL4Q0D2K0 466 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 CNTN1Q12860 1018 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 DHX34Q14147 1143 aaKnown RBP14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 UGP2Q16851 508 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 AGBL4Q5VU57 503 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 ERAP2Q6P179 960 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 GSTA5Q7RTV2 222 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 CAMK1DQ8IU85 385 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 AADATQ8N5Z0 425 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 PAF1Q8N7H5 531 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 OR2T34Q8NGX1 318 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 OR6K2Q8NGY2 324 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 GANCQ8TET4 914 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 FOXJ1Q92949 421 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 FEM1CQ96JP0 617 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 CAPZA3Q96KX2 299 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 FAM118BQ9BPY3 351 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 AP1M1Q9BXS5 423 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 HCN4Q9Y3Q4 1203 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 RAI2Q9Y5P3 530 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 RALGAPA1Q6GYQ0 2036 aa14.23□□□□□ -0.13
SUPT16H-208ENST00000557652 DOCK9Q9BZ29 2069 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 SDK1Q7Z5N4 2213 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 IGHV1OR15-9A0A0B4J2B8 117 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 A0A1W2PP55 124 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 ESPNB1AK53 854 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 H0Y858 1186 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 NDUFS2O75306 463 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 RPP40O75818 363 aaKnown RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 URI1O94763 535 aaPredicted RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 ECEL1O95672 775 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 CPP00450 1065 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 IFNB1P01574 187 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 MMP2P08253 660 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 CYP2A6P11509 494 aaPredicted RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 HLA-DPA1P20036 260 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 DEKP35659 375 aaKnown RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 CDK18Q07002 472 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 SNX1Q13596 522 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 PIP5KL1Q5T9C9 394 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 ARMC3Q5W041 872 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 KIAA1161Q6NSJ0 714 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 USP45Q70EL2 814 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 PARS2Q7L3T8 475 aaKnown RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 LINC00523Q86TU6 105 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 TTC7BQ86TV6 843 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 PRPF39Q86UA1 669 aaKnown RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 CCDC110Q8TBZ0 833 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 ASB12Q8WXK4 309 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 ARRDC3Q96B67 414 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 ZC3H10Q96K80 434 aaKnown RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 LYSMD1Q96S90 227 aa14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 DUSP15Q9H1R2 295 aaPredicted RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 EIF2B3Q9NR50 452 aaKnown RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 POLR3BQ9NW08 1133 aaPredicted RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 TNRC6BQ9UPQ9 1833 aaKnown RBP14.22□□□□□ -0.13
SUPT16H-208ENST00000557652 LOC285095A0A1B0GVY8 99 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 C10orf142B7Z368 130 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 SMAPO00193 183 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 PSMD11O00231 422 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 AREL1O15033 823 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 RHOBTB1O94844 696 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 PIGNO95427 931 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 SEMA4FO95754 770 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 NDST3O95803 873 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 ZNF30P17039 623 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 CCR5P51681 352 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 ADPRHP54922 357 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 GDF10P55107 478 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 TRAF2Q12933 501 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 SEMA5AQ13591 1074 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 ELF2Q15723 593 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 NAPEPLDQ6IQ20 393 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 TSSK4Q6SA08 328 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 MAATS1Q7Z4T9 603 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 TRIM69Q86WT6 500 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 SPATA4Q8NEY3 305 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 LRRN4Q8WUT4 740 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 ZNF592Q92610 1267 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 IFT43Q96FT9 208 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 SCRN2Q96FV2 425 aa14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 TOE1Q96GM8 510 aaKnown RBP14.21□□□□□ -0.13
SUPT16H-208ENST00000557652 LOXL4Q96JB6 756 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms