RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TIMP2P16035 220 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 WNT3AP56704 352 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 TUBB2AQ13885 445 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 SPARCL1Q14515 664 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 PIP5KL1Q5T9C9 394 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 ERN2Q76MJ5 926 aaKnown RBP15.4■□□□□ 0.06
NEDD1-213ENST00000557644 TTC7BQ86TV6 843 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 GRK7Q8WTQ7 553 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 MRGPRX2Q96LB1 330 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 TUBB2BQ9BVA1 445 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 PCDH9Q9HC56 1237 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 SCML1Q9UN30 329 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 TTI1O43156 1089 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 SP9P0CG40 484 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 ADRB3P13945 408 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 ACSL1P33121 698 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 ABL2P42684 1182 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 DR1Q01658 176 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 SRSF5Q13243 272 aaKnown RBP15.4■□□□□ 0.06
NEDD1-213ENST00000557644 GALNT3Q14435 633 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 PPP1R7Q15435 360 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 MAP7D1Q3KQU3 841 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 ARMC12Q5T9G4 340 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 FBXL19Q6PCT2 694 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 HDAC8Q9BY41 377 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 DKK3Q9UBP4 350 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 FEZ2Q9UHY8 353 aaPredicted RBP15.4■□□□□ 0.06
NEDD1-213ENST00000557644 GGT7Q9UJ14 662 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 ITM2BQ9Y287 266 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 ANKRD36A6QL64 1941 aa15.4■□□□□ 0.06
NEDD1-213ENST00000557644 TSPAN11A1L157 253 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 GAS8O95995 478 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 NEK3P51956 506 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 TAS2R38P59533 333 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 GPS1Q13098 491 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 UGP2Q16851 508 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 BRAT1Q6PJG6 821 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 USP30Q70CQ3 517 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 PDCD7Q8N8D1 485 aaKnown RBP15.39■□□□□ 0.05
NEDD1-213ENST00000557644 LPCAT1Q8NF37 534 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 PIH1D2Q8WWB5 315 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 SLCO2A1Q92959 643 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 TRIB3Q96RU7 358 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 APOL2Q9BQE5 337 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 TRIM51Q9BSJ1 452 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 VPS45Q9NRW7 570 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 IGHV1OR15-9A0A0B4J2B8 117 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 A0A0U1RQS6 177 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 SPINT1O43278 529 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 USP12O75317 370 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 ANXA9O76027 345 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 AGTP01019 485 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 CHRNA4P43681 627 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 BASP1P80723 227 aaKnown RBP15.39■□□□□ 0.05
NEDD1-213ENST00000557644 CDK18Q07002 472 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 MPP3Q13368 585 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 PRPSAP1Q14558 356 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 JAMLQ86YT9 394 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 OR14C36Q8NHC7 312 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 TOE1Q96GM8 510 aaKnown RBP15.39■□□□□ 0.05
NEDD1-213ENST00000557644 NCKAP1Q9Y2A7 1128 aa15.39■□□□□ 0.05
NEDD1-213ENST00000557644 AAR2Q9Y312 384 aaKnown RBP15.39■□□□□ 0.05
NEDD1-213ENST00000557644 CACNA1HO95180 2353 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 CCDC163A0A0D9SF12 145 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 FAM47DPA6NHR8 397 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 A8MX80 341 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 RAD51CO43502 376 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 ZNF217O75362 1048 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 CPP00450 1065 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 IGLV3-19P01714 112 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 CTPS1P17812 591 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 ADPRHP54922 357 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 GEMP55040 296 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 KCTD11Q693B1 232 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 KBTBD6Q86V97 674 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 WDR5BQ86VZ2 330 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 LONP2Q86WA8 852 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 NOA1Q8NC60 698 aaKnown RBP15.38■□□□□ 0.05
NEDD1-213ENST00000557644 FAM131CQ96AQ9 280 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 IFT43Q96FT9 208 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 FICDQ9BVA6 458 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 CARD6Q9BX69 1037 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 FSD1LQ9BXM9 530 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 PCDH12Q9NPG4 1184 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 MBD1Q9UIS9 605 aaPredicted RBP15.38■□□□□ 0.05
NEDD1-213ENST00000557644 PRR23AA6NEV1 266 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 UPK3BL1B0FP48 263 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 UPK3BL2E5RIL1 263 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 APRTP07741 180 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 ALPIP09923 528 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 FDFT1P37268 417 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 SLC14A2Q15849 920 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 USP39Q53GS9 565 aaKnown RBP15.38■□□□□ 0.05
NEDD1-213ENST00000557644 KLHDC8BQ8IXV7 354 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 SLC25A41Q8N5S1 370 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 LRRN4CLQ8ND94 238 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 HCAR2Q8TDS4 363 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 NELL1Q92832 810 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 BTBD1Q9H0C5 482 aa15.38■□□□□ 0.05
NEDD1-213ENST00000557644 PIH1D1Q9NWS0 290 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms