RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 MSH6P52701 1360 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 RTEL1-TNFRSF6BF6WH68 1400 aa4.89□□□□□ -1.63
PRPF39-212ENST00000557477 ERVK-7P63135 1459 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 LRRC9Q6ZRR7 1453 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 A6NNC1 897 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 KCNU1A8MYU2 1149 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 E5RJQ4 531 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 MASP2O00187 686 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 RNMTO43148 476 aaKnown RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 SEC14L2O76054 403 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 HEXAP06865 529 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 CYP19A1P11511 503 aaPredicted RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 PSMA4P25789 261 aaKnown RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 TNFSF8P32971 234 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 CPOXP36551 454 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 MLH1P40692 756 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 RARSP54136 660 aaKnown RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 CLDN2P57739 230 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 ARF3P61204 181 aaPredicted RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 RPL7AP62424 266 aaKnown RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 YWHAZP63104 245 aaKnown RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 ARF1P84077 181 aaKnown RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 ID2Q02363 134 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 PRKG2Q13237 762 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 MED22Q15528 200 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 MEA1Q16626 185 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 PIK3CD-AS1Q5SR53 167 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 SPATA1Q5VX52 437 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 CDC73Q6P1J9 531 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 CADM3Q8N126 398 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 SDF4Q9BRK5 362 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 PRSS22Q9GZN4 317 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 MUC13Q9H3R2 512 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 C11orf21Q9P2W6 132 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 INTS6Q9UL03 887 aaKnown RBP4.88□□□□□ -1.63
PRPF39-212ENST00000557477 RAP2CQ9Y3L5 183 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 KCNE2Q9Y6J6 123 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 ROBO1Q9Y6N7 1651 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 TMEM94Q12767 1356 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 KANK1Q14678 1352 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 MED14O60244 1454 aa4.88□□□□□ -1.63
PRPF39-212ENST00000557477 ABCC3O15438 1527 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 PHLPP1O60346 1717 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 CEP152O94986 1710 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 CGB1A6NKQ9 187 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 PRPF4O43172 522 aaKnown RBP eCLIP4.87□□□□□ -1.63
PRPF39-212ENST00000557477 TIPRLO75663 272 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 CHRNB1P11230 501 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 CTPS1P17812 591 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 ARL3P36405 182 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 INHBEP58166 350 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 OLR1P78380 273 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 GAD2Q05329 585 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 MAMLD1Q13495 774 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 RNPS1Q15287 305 aaKnown RBP4.87□□□□□ -1.63
PRPF39-212ENST00000557477 Q4G0T1 1027 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 C6orf10Q5SRN2 563 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 TXNDC8Q6A555 127 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 LRRC8EQ6NSJ5 796 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 DEF8Q6ZN54 512 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 SERPINA11Q86U17 422 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 GPSM1Q86YR5 675 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 KIAA2013Q8IYS2 634 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 HORMAD2Q8N7B1 307 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 USP6NLQ92738 828 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 INTS12Q96CB8 462 aaKnown RBP4.87□□□□□ -1.63
PRPF39-212ENST00000557477 MSI2Q96DH6 328 aaKnown RBP4.87□□□□□ -1.63
PRPF39-212ENST00000557477 WDR83Q9BRX9 315 aaKnown RBP4.87□□□□□ -1.63
PRPF39-212ENST00000557477 SEMA4CQ9C0C4 833 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 GHITMQ9H3K2 345 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 RNF146Q9NTX7 359 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 SEPT11Q9NVA2 429 aaKnown RBP4.87□□□□□ -1.63
PRPF39-212ENST00000557477 TBC1D29Q9UFV1 150 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 LIMA1Q9UHB6 759 aaKnown RBP4.87□□□□□ -1.63
PRPF39-212ENST00000557477 A4GNTQ9UNA3 340 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 GPR34Q9UPC5 381 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 LAS1LQ9Y4W2 734 aaKnown RBP4.87□□□□□ -1.63
PRPF39-212ENST00000557477 NCOA2Q15596 1464 aa4.87□□□□□ -1.63
PRPF39-212ENST00000557477 ALKQ9UM73 1620 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 STRCP1A6NGW2 1772 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 EBAG9O00559 213 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TLX3O43711 291 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 LIASO43766 372 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TLR2O60603 784 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 CCNDBP1O95273 360 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TOP3BO95985 862 aaKnown RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TTKP33981 857 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 RYKP34925 604 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 CENPAP49450 140 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 NAP1L1P55209 391 aaKnown RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 CEBPZQ03701 1054 aaKnown RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 PDE1CQ14123 709 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 VEPH1Q14D04 833 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TOMM20Q15388 145 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 ALG11Q2TAA5 492 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 ATG9BQ674R7 924 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 ZNF772Q68DY9 489 aaPredicted RBP4.86□□□□□ -1.63
PRPF39-212ENST00000557477 TMEM71Q6P5X7 295 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 CYP20A1Q6UW02 462 aa4.86□□□□□ -1.63
PRPF39-212ENST00000557477 FAM83HQ6ZRV2 1179 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms