RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 RBM39Q14498 530 aaKnown RBP4.28□□□□□ -1.72
VRK1-207ENST00000557352 FBXL22Q6P050 247 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 ZNF449Q6P9G9 518 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 CHD1LQ86WJ1 897 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 CCDC146Q8IYE0 955 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 VPS37AQ8NEZ2 397 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 SECTM1Q8WVN6 248 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 CD101Q93033 1021 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 MMTAG2Q9BU76 263 aaKnown RBP4.28□□□□□ -1.72
VRK1-207ENST00000557352 SMARCAL1Q9NZC9 954 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 NDRG3Q9UGV2 375 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 PCDHAC2Q9Y5I4 1007 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 FANCD2Q9BXW9 1451 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 PDS5BQ9NTI5 1447 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 KIF21BO75037 1637 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 ADGRF5Q8IZF2 1346 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 CEP164Q9UPV0 1460 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.27□□□□□ -1.73
VRK1-207ENST00000557352 HNRNPCL2B2RXH8 293 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 EBAG9O00559 213 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 HSPA12AO43301 675 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 KDM4BO94953 1096 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 CLDN14O95500 239 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 CHAF1AQ13111 956 aaPredicted RBP4.27□□□□□ -1.73
VRK1-207ENST00000557352 TUBB8Q3ZCM7 444 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 CTXN3Q4LDR2 81 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 CCDC174Q6PII3 467 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 SHFQ7M4L6 423 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 PRSS45Q7RTY3 260 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 SPICE1Q8N0Z3 855 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 GDPD5Q8WTR4 605 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 TMEM255BQ8WV15 326 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 AFG1LQ8WV93 481 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 EBF2Q9HAK2 575 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 KIF17Q9P2E2 1029 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 SLCO3A1Q9UIG8 710 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 SNX9Q9Y5X1 595 aa4.27□□□□□ -1.73
VRK1-207ENST00000557352 WNT9BO14905 357 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 RGS11O94810 467 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 CHRM4P08173 479 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 PIGAP37287 484 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 BRWD1-AS2P59051 145 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 ACTR2P61160 394 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 ECT2LQ008S8 904 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 TROAPQ12815 778 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 IL20RBQ6UXL0 311 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 ZC3HC1Q86WB0 502 aaKnown RBP4.26□□□□□ -1.73
VRK1-207ENST00000557352 LURAP1LQ8IV03 231 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 TMEM57Q8N5G2 664 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 ZNF441Q8N8Z8 693 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 SLC39A13Q96H72 371 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 CSF3RQ99062 836 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 CLSTN3Q9BQT9 956 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 CYSLTR2Q9NS75 346 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 SLC9A2Q9UBY0 812 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 DNAJC16Q9Y2G8 782 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 ADAM18Q9Y3Q7 739 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 WDR62O43379 1518 aa4.26□□□□□ -1.73
VRK1-207ENST00000557352 NESP48681 1621 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 B9A039 149 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 ATP2C2O75185 946 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 LINC00271P0C7V0 271 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 SRD5A1P18405 259 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 RYKP34925 604 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 ZNF132P52740 706 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 HDAC4P56524 1084 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 NLRP5P59047 1200 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 ZBTB17Q13105 803 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 POSTNQ15063 836 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 RBBP5Q15291 538 aaKnown RBP4.25□□□□□ -1.73
VRK1-207ENST00000557352 MAB21L3Q8N8X9 362 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 THOC2Q8NI27 1593 aaKnown RBP4.25□□□□□ -1.73
VRK1-207ENST00000557352 TRAPPC12Q8WVT3 735 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 RILPL2Q969X0 211 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 WBP1Q96G27 269 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 PAGR1Q9BTK6 254 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 LMAN2LQ9H0V9 348 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 MMP28Q9H239 520 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 NOX4Q9NPH5 578 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 ZNF224Q9NZL3 707 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 TAGLN3Q9UI15 199 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 CUL7Q14999 1698 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 ERICH3Q5RHP9 1530 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 TOPBP1Q92547 1522 aa4.25□□□□□ -1.73
VRK1-207ENST00000557352 TYW5A2RUC4 315 aaKnown RBP4.24□□□□□ -1.73
VRK1-207ENST00000557352 CBY3A6NI87 242 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 ZIC3O60481 467 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 RXRAP19793 462 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 GLIPR1P48060 266 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 ZNF155Q12901 538 aaPredicted RBP4.24□□□□□ -1.73
VRK1-207ENST00000557352 PRKG1Q13976 671 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 UBE4AQ14139 1066 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 BRD3Q15059 726 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 OASLQ15646 514 aaKnown RBP4.24□□□□□ -1.73
VRK1-207ENST00000557352 SOWAHAQ2M3V2 549 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 ESCO2Q56NI9 601 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 CES5AQ6NT32 575 aa4.24□□□□□ -1.73
VRK1-207ENST00000557352 GDPD4Q6W3E5 623 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms