RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 PDHA1P08559 390 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 TBC1D3HP0C7X1 549 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 NFKB1P19838 968 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 MSNP26038 577 aaKnown RBP21.09■□□□□ 0.97
SEC23A-213ENST00000557280 PTPRRQ15256 657 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 SPDYCQ5MJ68 293 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 CFAP58Q5T655 872 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 SEL1L3Q68CR1 1132 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 TBC1D3GQ6DHY5 549 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 TBC1D3CQ6IPX1 549 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 BRAT1Q6PJG6 821 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 TTC7BQ86TV6 843 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 TBC1D3Q8IZP1 549 aaPredicted RBP21.09■□□□□ 0.97
SEC23A-213ENST00000557280 RASGEF1CQ8N431 466 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 SPATA22Q8NHS9 363 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 IMP4Q96G21 291 aaKnown RBP21.09■□□□□ 0.97
SEC23A-213ENST00000557280 SMIM14Q96QK8 99 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 GORASP1Q9BQQ3 440 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 ORAI3Q9BRQ5 295 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 TMEM121Q9BTD3 319 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 TDRD1Q9BXT4 1180 aaKnown RBP21.09■□□□□ 0.97
SEC23A-213ENST00000557280 SMOC1Q9H4F8 434 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 PREBQ9HCU5 417 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 PCDH12Q9NPG4 1184 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 ZFR2Q9UPR6 939 aaKnown RBP21.09■□□□□ 0.97
SEC23A-213ENST00000557280 PCDHB9Q9Y5E1 797 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 SDK1Q7Z5N4 2213 aa21.09■□□□□ 0.97
SEC23A-213ENST00000557280 RNGTTO60942 597 aaKnown RBP21.08■□□□□ 0.97
SEC23A-213ENST00000557280 PGLSO95336 258 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 MT-CYBP00156 380 aaPredicted RBP21.08■□□□□ 0.97
SEC23A-213ENST00000557280 MAT2AP31153 395 aaKnown RBP21.08■□□□□ 0.97
SEC23A-213ENST00000557280 CREB5Q02930 508 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 SNX1Q13596 522 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 OASLQ15646 514 aaKnown RBP21.08■□□□□ 0.97
SEC23A-213ENST00000557280 UGP2Q16851 508 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 KCTD19Q17RG1 926 aaPredicted RBP21.08■□□□□ 0.97
SEC23A-213ENST00000557280 LONRF2Q1L5Z9 754 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 CYP2U1Q7Z449 544 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 DCLK2Q8N568 766 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 FAM71DQ8N9W8 422 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 CCDC110Q8TBZ0 833 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 HCAR2Q8TDS4 363 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 FOXJ1Q92949 421 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 TADA1Q96BN2 335 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 PBKQ96KB5 322 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 PCED1AQ9H1Q7 454 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 SLC25A51Q9H1U9 297 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 ARRDC1-AS1Q9H2J1 176 aa21.08■□□□□ 0.97
SEC23A-213ENST00000557280 A0A1W2PQU0 124 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 AP1G1O43747 822 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 FZD6O60353 706 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 PCDH8O95206 1070 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 CPP00450 1065 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 PRLP01236 227 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 SERPINF2P08697 491 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 PID1Q7Z2X4 250 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 TRIM69Q86WT6 500 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 PAF1Q8N7H5 531 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 PIGKQ92643 395 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 KLK6Q92876 244 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 OXNAD1Q96HP4 312 aaPredicted RBP21.07■□□□□ 0.96
SEC23A-213ENST00000557280 LOXL4Q96JB6 756 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 KDM4CQ9H3R0 1056 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 HAUS2Q9NVX0 235 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 UBP1Q9NZI7 540 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 EIF2B4Q9UI10 523 aaKnown RBP21.07■□□□□ 0.96
SEC23A-213ENST00000557280 CHKBQ9Y259 395 aa21.07■□□□□ 0.96
SEC23A-213ENST00000557280 RETP07949 1114 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 MMP12P39900 470 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 MPLP40238 635 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 CCDC15Q0P6D6 951 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 RALGDSQ12967 914 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 FGL2Q14314 439 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 ZNF284Q2VY69 593 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 TMEM259Q4ZIN3 620 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 ANKRD20A2Q5SQ80 823 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 ANKRD20A1Q5TYW2 823 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 ANKRD20A3Q5VUR7 823 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 PRUNE1Q86TP1 453 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 HORMAD1Q86X24 394 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 RGL4Q8IZJ4 473 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 PRELID2Q8N945 189 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 PIH1D2Q8WWB5 315 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 DNASE2BQ8WZ79 361 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 SPOCK2Q92563 424 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 RAB7BQ96AH8 199 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 SPATA13Q96N96 652 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 VAT1Q99536 393 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 NAPGQ99747 312 aaPredicted RBP21.06■□□□□ 0.96
SEC23A-213ENST00000557280 WRAP53Q9BUR4 548 aaKnown RBP21.06■□□□□ 0.96
SEC23A-213ENST00000557280 GBA3Q9H227 469 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 NCDNQ9UBB6 729 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 RSPH14Q9UHP6 348 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 GMEB2Q9UKD1 530 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 PILRBQ9UKJ0 227 aa21.06■□□□□ 0.96
SEC23A-213ENST00000557280 A0A0U1RQS6 177 aa21.05■□□□□ 0.96
SEC23A-213ENST00000557280 PATE3B3GLJ2 98 aa21.05■□□□□ 0.96
SEC23A-213ENST00000557280 RIOK3O14730 519 aaKnown RBP21.05■□□□□ 0.96
SEC23A-213ENST00000557280 WNT9AO14904 365 aa21.05■□□□□ 0.96
SEC23A-213ENST00000557280 LATO43561 262 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms