RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 ACAD10Q6JQN1 1059 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 BRAT1Q6PJG6 821 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 RBM44Q6ZP01 1051 aaKnown RBP11.63□□□□□ -0.55
LRP1-209ENST00000555941 EFL1Q7Z2Z2 1120 aaKnown RBP11.63□□□□□ -0.55
LRP1-209ENST00000555941 VPS36Q86VN1 386 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 SPACA3Q8IXA5 215 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 PHACTR4Q8IZ21 702 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 MCOLN2Q8IZK6 566 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 PYROXD2Q8N2H3 581 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 FSTL5Q8N475 847 aaPredicted RBP11.63□□□□□ -0.55
LRP1-209ENST00000555941 TP53I13Q8NBR0 393 aaPredicted RBP11.63□□□□□ -0.55
LRP1-209ENST00000555941 ATL2Q8NHH9 583 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 SCG3Q8WXD2 468 aaKnown RBP11.63□□□□□ -0.55
LRP1-209ENST00000555941 HMCESQ96FZ2 354 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 FCRL3Q96P31 734 aaPredicted RBP11.63□□□□□ -0.55
LRP1-209ENST00000555941 MCEEQ96PE7 176 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 GBP4Q96PP9 640 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 TUBGCP5Q96RT8 1024 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 LGMNQ99538 433 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 NCAPGQ9BPX3 1015 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 DPH1Q9BZG8 443 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 SUV39H2Q9H5I1 410 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 THSD1Q9NS62 852 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 LHX3Q9UBR4 397 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 UBA2Q9UBT2 640 aaPredicted RBP11.63□□□□□ -0.55
LRP1-209ENST00000555941 RAI2Q9Y5P3 530 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 KALRNO60229 2985 aa11.63□□□□□ -0.55
LRP1-209ENST00000555941 CFAP69A5D8W1 941 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 YY2O15391 372 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 GCATO75600 419 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 MPOP05164 745 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 ALPIP09923 528 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 MYF5P13349 255 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 TGM2P21980 687 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 HTR1BP28222 390 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 RBMS1P29558 406 aaKnown RBP11.62□□□□□ -0.55
LRP1-209ENST00000555941 ZNF135P52742 658 aaPredicted RBP11.62□□□□□ -0.55
LRP1-209ENST00000555941 ADKP55263 362 aaKnown RBP11.62□□□□□ -0.55
LRP1-209ENST00000555941 TPI1P60174 286 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 C19orf57Q0VDD7 668 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 CCDC173Q0VFZ6 552 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 LRRC14Q15048 493 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 ELOCQ15369 112 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 CYTH1Q15438 398 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 UGP2Q16851 508 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 KLHL40Q2TBA0 621 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 ESRP1Q6NXG1 681 aaKnown RBP11.62□□□□□ -0.55
LRP1-209ENST00000555941 ERAP2Q6P179 960 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 GUSBP11Q6P575 273 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 PSTKQ8IV42 348 aaKnown RBP11.62□□□□□ -0.55
LRP1-209ENST00000555941 SLC39A7Q92504 469 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 CCDC97Q96F63 343 aaPredicted RBP11.62□□□□□ -0.55
LRP1-209ENST00000555941 LRRC61Q9BV99 259 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 KLC2Q9H0B6 622 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 LRRC19Q9H756 370 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 PDFQ9HBH1 243 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 PARVAQ9NVD7 372 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 PCDHGA8Q9Y5G5 932 aa11.62□□□□□ -0.55
LRP1-209ENST00000555941 CAPN8A6NHC0 703 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 ARHGAP42A6NI28 874 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 GOLGA6L22H0YM25 854 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 TMX2-CTNND1H3BSU7 103 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 PRAMEF11O60813 436 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 RASGRP1O95267 797 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 TSHRP16473 764 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 TNFAIP3P21580 790 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 HK3P52790 923 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 TMPRSS3P57727 454 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
LRP1-209ENST00000555941 NSUN2Q08J23 767 aaKnown RBP eCLIP11.61□□□□□ -0.55
LRP1-209ENST00000555941 MAMLD1Q13495 774 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 RFTN1Q14699 578 aaPredicted RBP11.61□□□□□ -0.55
LRP1-209ENST00000555941 IRF4Q15306 451 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 CFAP58Q5T655 872 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
LRP1-209ENST00000555941 IRF2BP2Q7Z5L9 587 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 SLC35F3Q8IY50 421 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 RBFAQ8N0V3 343 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 OR6C4Q8NGE1 309 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 WBP1Q96G27 269 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 SLC46A1Q96NT5 459 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 WRAP53Q9BUR4 548 aaKnown RBP11.61□□□□□ -0.55
LRP1-209ENST00000555941 NAT10Q9H0A0 1025 aaKnown RBP11.61□□□□□ -0.55
LRP1-209ENST00000555941 ATP13A3Q9H7F0 1226 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 CAAP1Q9H8G2 361 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 PCDH12Q9NPG4 1184 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 ASCL3Q9NQ33 180 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 MBNL1Q9NR56 388 aaKnown RBP11.61□□□□□ -0.55
LRP1-209ENST00000555941 PADI4Q9UM07 663 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 RP1P56715 2156 aa11.61□□□□□ -0.55
LRP1-209ENST00000555941 MUSKO15146 869 aa11.6□□□□□ -0.55
LRP1-209ENST00000555941 RNF8O76064 485 aa11.6□□□□□ -0.55
LRP1-209ENST00000555941 GZMAP12544 262 aa11.6□□□□□ -0.55
LRP1-209ENST00000555941 ATP1A3P13637 1013 aa11.6□□□□□ -0.55
LRP1-209ENST00000555941 CTSEP14091 401 aa11.6□□□□□ -0.55
LRP1-209ENST00000555941 SERPINA4P29622 427 aa11.6□□□□□ -0.55
LRP1-209ENST00000555941 ANP32AP39687 249 aaKnown RBP11.6□□□□□ -0.55
LRP1-209ENST00000555941 HCAR3P49019 387 aa11.6□□□□□ -0.55
LRP1-209ENST00000555941 C1orf61Q13536 156 aa11.6□□□□□ -0.55
LRP1-209ENST00000555941 NFATC4Q14934 902 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms