RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 GPR27Q9NS67 375 aa24.69■■□□□ 1.54
PRKCH-216ENST00000555542 IGF2RP11717 2491 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 TRABD2BA6NFA1 517 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 CSF2P04141 144 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 RARAP10276 462 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 NME1P15531 152 aaKnown RBP24.68■■□□□ 1.54
PRKCH-216ENST00000555542 AMPD1P23109 780 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 IGFALSP35858 605 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 RGRP47804 291 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 KRT81Q14533 505 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 HES3Q5TGS1 186 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 KDM7AQ6ZMT4 941 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 CENPTQ96BT3 561 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 CAAP1Q9H8G2 361 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 PCDH12Q9NPG4 1184 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 EVA1BQ9NVM1 165 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 NLGN3Q9NZ94 848 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 ANKRD36A6QL64 1941 aa24.68■■□□□ 1.54
PRKCH-216ENST00000555542 MYO1FO00160 1098 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 BUB1BO60566 1050 aaPredicted RBP24.67■■□□□ 1.54
PRKCH-216ENST00000555542 CYP1A2P05177 515 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 JUNDP17535 347 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 ACP1P24666 158 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 CSNK1DP48730 415 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 RENBPP51606 427 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 PFN3P60673 137 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 BCL2L1Q07817 233 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 ZNF235Q14590 738 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 TMEM52BQ4KMG9 183 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 TMCO4Q5TGY1 634 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 POLNQ7Z5Q5 900 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 PDCD7Q8N8D1 485 aaKnown RBP24.67■■□□□ 1.54
PRKCH-216ENST00000555542 ZNF548Q8NEK5 533 aaPredicted RBP24.67■■□□□ 1.54
PRKCH-216ENST00000555542 DUSP23Q9BVJ7 150 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 SEPT3Q9UH03 358 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 COQ6Q9Y2Z9 468 aa24.67■■□□□ 1.54
PRKCH-216ENST00000555542 TSPAN11A1L157 253 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 SCAMP1O15126 338 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 CBFA2T2O43439 604 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 LZTS3O60299 673 aaPredicted RBP24.66■■□□□ 1.54
PRKCH-216ENST00000555542 NEBLO76041 1014 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 SCNN1BP51168 640 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 LBRQ14739 615 aaKnown RBP24.66■■□□□ 1.54
PRKCH-216ENST00000555542 HADHQ16836 314 aaKnown RBP24.66■■□□□ 1.54
PRKCH-216ENST00000555542 TP53INP2Q8IXH6 220 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 NIPA2Q8N8Q9 360 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 LMX1AQ8TE12 382 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 TEKT4Q8WW24 435 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 CSPG4P5Q96PW8 444 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 ATP8A1Q9Y2Q0 1164 aa24.66■■□□□ 1.54
PRKCH-216ENST00000555542 GOLGA4Q13439 2230 aaKnown RBP24.66■■□□□ 1.54
PRKCH-216ENST00000555542 ARID1BQ8NFD5 2236 aaPredicted RBP24.65■■□□□ 1.54
PRKCH-216ENST00000555542 TAF4O00268 1085 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 PRKCGP05129 697 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 C6P13671 934 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 SERPINB6P35237 376 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 GJC1P36383 396 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 YPEL5P62699 121 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 SEMG2Q02383 582 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 CYP4F3Q08477 520 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 LRRC14Q15048 493 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 IRF4Q15306 451 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 TPRG1LQ5T0D9 272 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 TXNRD3NBQ6F5E7 133 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 BBS5Q8N3I7 341 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 ATPAF2Q8N5M1 289 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 TP53I13Q8NBR0 393 aaPredicted RBP24.65■■□□□ 1.54
PRKCH-216ENST00000555542 ZNF564Q8TBZ8 553 aaPredicted RBP24.65■■□□□ 1.54
PRKCH-216ENST00000555542 NSMCE1Q8WV22 266 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 BTN2A2Q8WVV5 523 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 APOLD1Q96LR9 279 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 ZNF599Q96NL3 588 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 DEF6Q9H4E7 631 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 PCDH18Q9HCL0 1135 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 MBNL1Q9NR56 388 aaKnown RBP24.65■■□□□ 1.54
PRKCH-216ENST00000555542 WDFY3Q8IZQ1 3526 aa24.65■■□□□ 1.54
PRKCH-216ENST00000555542 K7ESM1 405 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 RIOK3O14730 519 aaKnown RBP24.64■■□□□ 1.54
PRKCH-216ENST00000555542 AQP9O43315 295 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 CAPNS1P04632 268 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 EIF4A3P38919 411 aaKnown RBP24.64■■□□□ 1.54
PRKCH-216ENST00000555542 LIG3P49916 1009 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 CDH6P55285 790 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 E2F1Q01094 437 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 SLC25A11Q02978 314 aaKnown RBP24.64■■□□□ 1.54
PRKCH-216ENST00000555542 NSUN2Q08J23 767 aaKnown RBP eCLIP24.64■■□□□ 1.54
PRKCH-216ENST00000555542 TARDBPQ13148 414 aaKnown RBP eCLIP24.64■■□□□ 1.54
PRKCH-216ENST00000555542 FAXCQ5TGI0 409 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 SLC13A1Q9BZW2 595 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 ETNK2Q9NVF9 386 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 CTTNBP2NLQ9P2B4 639 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 SPASTQ9UBP0 616 aa24.64■■□□□ 1.54
PRKCH-216ENST00000555542 APOBEC3BQ9UH17 382 aaKnown RBP24.64■■□□□ 1.54
PRKCH-216ENST00000555542 LRRK1Q38SD2 2015 aa24.63■■□□□ 1.53
PRKCH-216ENST00000555542 TOR1BO14657 336 aa24.63■■□□□ 1.53
PRKCH-216ENST00000555542 TPM1P09493 284 aa24.63■■□□□ 1.53
PRKCH-216ENST00000555542 CKMT1AP12532 417 aa24.63■■□□□ 1.53
PRKCH-216ENST00000555542 MMP12P39900 470 aa24.63■■□□□ 1.53
PRKCH-216ENST00000555542 DUSP3P51452 185 aaPredicted RBP24.63■■□□□ 1.53
PRKCH-216ENST00000555542 AP1S1P61966 158 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms