RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 GAGE1Q13065 139 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 GAGE4Q13068 117 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 TUBB8Q3ZCM7 444 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 SH2D4BQ5SQS7 431 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 FAM83BQ5T0W9 1011 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 GDPD4Q6W3E5 623 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 DGLUCYQ7Z3D6 616 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 MAB21L3Q8N8X9 362 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 WDSUB1Q8N9V3 476 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 VPS37AQ8NEZ2 397 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 SPATA22Q8NHS9 363 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 LNX1Q8TBB1 728 aaPredicted RBP3.64□□□□□ -1.83
SNX6-204ENST00000555541 RNFT2Q96EX2 444 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 MASTLQ96GX5 879 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 DUX3Q96PT4 197 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 TRMT61BQ9BVS5 477 aaKnown RBP3.64□□□□□ -1.83
SNX6-204ENST00000555541 NPLQ9BXD5 320 aaPredicted RBP3.64□□□□□ -1.83
SNX6-204ENST00000555541 PTPRHQ9HD43 1115 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 TAGLN3Q9UI15 199 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 PCDHAC2Q9Y5I4 1007 aa3.64□□□□□ -1.83
SNX6-204ENST00000555541 ANTXRLA6NF34 631 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 TK1P04183 234 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 MYF6P23409 242 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 HNF1BP35680 557 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 AARSP49588 968 aaKnown RBP eCLIP3.63□□□□□ -1.83
SNX6-204ENST00000555541 FUT6P51993 359 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 ARSFP54793 590 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 GOLGA8FQ08AF8 430 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 CHAF1AQ13111 956 aaPredicted RBP3.63□□□□□ -1.83
SNX6-204ENST00000555541 TRIM14Q14142 442 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 MORC3Q14149 939 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 BRD3Q15059 726 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 CALCRLQ16602 461 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 DCAF6Q58WW2 860 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 CBWD5Q5RIA9 395 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 PLA2G4FQ68DD2 849 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 MYPOPQ86VE0 399 aaPredicted RBP3.63□□□□□ -1.83
SNX6-204ENST00000555541 DENND6AQ8IWF6 608 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 SAMD3Q8N6K7 520 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 ZMIZ2Q8NF64 920 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 DBF4BQ8NFT6 615 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 RASSF8Q8NHQ8 419 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 LRRC8CQ8TDW0 803 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 RUBCNQ92622 972 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 RBM17Q96I25 401 aaKnown RBP3.63□□□□□ -1.83
SNX6-204ENST00000555541 LRFN5Q96NI6 719 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 ZNF696Q9H7X3 374 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 CHODLQ9H9P2 273 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 LRRC4Q9HBW1 653 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 OR6C3Q9NZP0 311 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 CGNL1Q0VF96 1302 aa3.63□□□□□ -1.83
SNX6-204ENST00000555541 STX16-NPEPL1H3BU86 382 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 STX16O14662 325 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 ADAP00813 363 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 CD72P21854 359 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 MARK3P27448 753 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 TTKP33981 857 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 CDKN1AP38936 164 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 ATP12AP54707 1039 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 NLRP5P59047 1200 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 PHEXP78562 749 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 CAPSQ13938 189 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 FBXO43Q4G163 708 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 PLEKHO1Q53GL0 409 aaPredicted RBP3.62□□□□□ -1.83
SNX6-204ENST00000555541 NAPEPLDQ6IQ20 393 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 DENND1BQ6P3S1 775 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 CCDC174Q6PII3 467 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 TRMT1LQ7Z2T5 733 aaKnown RBP3.62□□□□□ -1.83
SNX6-204ENST00000555541 MON1AQ86VX9 555 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 EPHX4Q8IUS5 362 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 MB21D2Q8IYB1 491 aaPredicted RBP3.62□□□□□ -1.83
SNX6-204ENST00000555541 GHDCQ8N2G8 530 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 TMEM170AQ8WVE7 144 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 TRAPPC12Q8WVT3 735 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 RNF183Q96D59 192 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 TTC12Q9H892 705 aaPredicted RBP3.62□□□□□ -1.83
SNX6-204ENST00000555541 FBRSL1Q9HCM7 1045 aaKnown RBP3.62□□□□□ -1.83
SNX6-204ENST00000555541 CNPY2Q9Y2B0 182 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 DERAQ9Y315 318 aa3.62□□□□□ -1.83
SNX6-204ENST00000555541 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.61□□□□□ -1.83
SNX6-204ENST00000555541 HSPA12AO43301 675 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 SLC25A17O43808 307 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 EDIL3O43854 480 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 DHX16O60231 1041 aaKnown RBP3.61□□□□□ -1.83
SNX6-204ENST00000555541 SLC22A3O75751 556 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 TBX6O95947 436 aaPredicted RBP3.61□□□□□ -1.83
SNX6-204ENST00000555541 CHKAP35790 457 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 LINC01547P58512 204 aaPredicted RBP3.61□□□□□ -1.83
SNX6-204ENST00000555541 ACTR2P61160 394 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 KRT72Q14CN4 511 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 POSTNQ15063 836 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 CTXN3Q4LDR2 81 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 NEK10Q6ZWH5 1172 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 ARRDC2Q8TBH0 407 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 ZNF501Q96CX3 271 aaPredicted RBP3.61□□□□□ -1.83
SNX6-204ENST00000555541 FBXO17Q96EF6 278 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 FEM1CQ96JP0 617 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 YME1L1Q96TA2 773 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 CSF3RQ99062 836 aa3.61□□□□□ -1.83
SNX6-204ENST00000555541 ENTPD7Q9NQZ7 604 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms