RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 BAG5Q9UL15 447 aa3.05□□□□□ -1.92
SRP54-207ENST00000555535 CPED1A4D0V7 1026 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 OR6C68A6NDL8 312 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 CLDN14O95500 239 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 CBX6O95503 412 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 TFRCP02786 760 aaKnown RBP3.04□□□□□ -1.92
SRP54-207ENST00000555535 PDIA3P30101 505 aaKnown RBP3.04□□□□□ -1.92
SRP54-207ENST00000555535 SLC18A2Q05940 514 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 ZBTB17Q13105 803 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 RPE65Q16518 533 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 ME3Q16798 604 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 AP5B1Q2VPB7 878 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 ZNF876PQ49A33 203 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 KLHL24Q6TFL4 600 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 CCDC129Q6ZRS4 1044 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 MB21D2Q8IYB1 491 aaPredicted RBP3.04□□□□□ -1.92
SRP54-207ENST00000555535 SETD9Q8NE22 299 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 DMBX1Q8NFW5 382 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 LNX1Q8TBB1 728 aaPredicted RBP3.04□□□□□ -1.92
SRP54-207ENST00000555535 CSF3RQ99062 836 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 PLEKHA2Q9HB19 425 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 TLR8Q9NR97 1041 aaKnown RBP3.04□□□□□ -1.92
SRP54-207ENST00000555535 CHST12Q9NRB3 414 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 ATP8A2Q9NTI2 1148 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 OR6C3Q9NZP0 311 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 NDUFAF4Q9P032 175 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 CHPF2Q9P2E5 772 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 DHDHQ9UQ10 334 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 PAM16Q9Y3D7 125 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 ZNF711Q9Y462 761 aa3.04□□□□□ -1.92
SRP54-207ENST00000555535 A0A1W2PS18 150 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 hDV102S1A0JD36 115 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 TUBBP07437 444 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 CSF1P09603 554 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 WEE2P0C1S8 567 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 NBPF7P0C2Y1 421 aaPredicted RBP3.03□□□□□ -1.92
SRP54-207ENST00000555535 CTPS1P17812 591 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 CD72P21854 359 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 GJC1P36383 396 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 SERPINF1P36955 418 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 GNALP38405 381 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 CLCN3P51790 818 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 TUBB4BP68371 445 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 BYSLQ13895 437 aaKnown RBP3.03□□□□□ -1.92
SRP54-207ENST00000555535 IL13RA2Q14627 380 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 FBXO43Q4G163 708 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 SATL1Q86VE3 508 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 MON1AQ86VX9 555 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 GALNT15Q8N3T1 639 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 ZNF527Q8NB42 609 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 ARRDC2Q8TBH0 407 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 OTUD7AQ8TE49 926 aaPredicted RBP3.03□□□□□ -1.92
SRP54-207ENST00000555535 C17orf77Q96MU5 243 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 TRAPPC9Q96Q05 1148 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 ASCL2Q99929 193 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 WDR13Q9H1Z4 485 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 METTL14Q9HCE5 456 aaKnown RBP3.03□□□□□ -1.92
SRP54-207ENST00000555535 PTPRHQ9HD43 1115 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 TMEM160Q9NX00 188 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 SLC9A2Q9UBY0 812 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 FBXO40Q9UH90 709 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 VDAC3Q9Y277 283 aa3.03□□□□□ -1.92
SRP54-207ENST00000555535 A0A087WV62 115 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 ZNF587BE7ETH6 402 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 SLC25A17O43808 307 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 STRNO43815 780 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 IL1AP01583 271 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 LINC00271P0C7V0 271 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 LINC01547P58512 204 aaPredicted RBP3.02□□□□□ -1.93
SRP54-207ENST00000555535 ARHGAP8P85298 464 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 SH2D4BQ5SQS7 431 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 CCDC181Q5TID7 509 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 SULT6B1Q6IMI4 303 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 XRRA1Q6P2D8 792 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 KLHL17Q6TDP4 642 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 SYT13Q7L8C5 426 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 CCDC117Q8IWD4 279 aaPredicted RBP3.02□□□□□ -1.93
SRP54-207ENST00000555535 FAM186BQ8IYM0 893 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 ATG16L2Q8NAA4 619 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 SPATA22Q8NHS9 363 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 LRFN5Q96NI6 719 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 YME1L1Q96TA2 773 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 NOX4Q9NPH5 578 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 CLDN16Q9Y5I7 305 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 SNX9Q9Y5X1 595 aa3.02□□□□□ -1.93
SRP54-207ENST00000555535 PMS2P5A8MQ11 134 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 KRTAP16-1A8MUX0 517 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 HSPA12AO43301 675 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 TIPRLO75663 272 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 SRCP12931 536 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 TTKP33981 857 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 IL15P40933 162 aaPredicted RBP3.01□□□□□ -1.93
SRP54-207ENST00000555535 PNPLA4P41247 253 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 CENPAP49450 140 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 FUT6P51993 359 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 ZNF155Q12901 538 aaPredicted RBP3.01□□□□□ -1.93
SRP54-207ENST00000555535 PICALMQ13492 652 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 THOC5Q13769 683 aaKnown RBP3.01□□□□□ -1.93
SRP54-207ENST00000555535 TNFAIP1Q13829 316 aa3.01□□□□□ -1.93
SRP54-207ENST00000555535 HLTFQ14527 1009 aaKnown RBP eCLIP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms