RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RNF168Q8IYW5 571 aaPredicted RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 LSMEM2Q8N112 164 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 ENDOVQ8N8Q3 282 aaKnown RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 KCNV2Q8TDN2 545 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 CLSTN3Q9BQT9 956 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 TACO1Q9BSH4 297 aaKnown RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 POLR1EQ9GZS1 481 aaKnown RBP24.46■■□□□ 1.51
TMEM260-207ENST00000555497 IGSF5Q9NSI5 407 aa24.46■■□□□ 1.51
TMEM260-207ENST00000555497 MEI4A8MW99 385 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 SGSHP51688 502 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 ACSBG2Q5FVE4 666 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 ARMC3Q5W041 872 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 CILP2Q8IUL8 1156 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 DENND1CQ8IV53 801 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 CLPTM1LQ96KA5 538 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 PRICKLE1Q96MT3 831 aaPredicted RBP24.45■■□□□ 1.5
TMEM260-207ENST00000555497 ILKAPQ9H0C8 392 aaPredicted RBP24.45■■□□□ 1.5
TMEM260-207ENST00000555497 CXorf56Q9H5V9 222 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 GKN1Q9NS71 199 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 C15orf41Q9Y2V0 281 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 BUD23O43709 281 aaKnown RBP24.45■■□□□ 1.5
TMEM260-207ENST00000555497 PIGNO95427 931 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 GLDCP23378 1020 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 CPOXP36551 454 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 GNA12Q03113 381 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 ZNF235Q14590 738 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 PHTF2Q8N3S3 785 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 OR6P1Q8NGX9 317 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 CALML6Q8TD86 181 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 WBP2Q969T9 261 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 SGF29Q96ES7 293 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 OR52B2Q96RD2 323 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 SHCBP1LQ9BZQ2 653 aa24.45■■□□□ 1.5
TMEM260-207ENST00000555497 SUDS3Q9H7L9 328 aaPredicted RBP24.45■■□□□ 1.5
TMEM260-207ENST00000555497 PAK6Q9NQU5 681 aaPredicted RBP24.45■■□□□ 1.5
TMEM260-207ENST00000555497 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.45■■□□□ 1.5
TMEM260-207ENST00000555497 SLC7A4O43246 635 aa24.44■■□□□ 1.5
TMEM260-207ENST00000555497 NCF2P19878 526 aaPredicted RBP24.44■■□□□ 1.5
TMEM260-207ENST00000555497 TUFMP49411 452 aaKnown RBP24.44■■□□□ 1.5
TMEM260-207ENST00000555497 PRMT2P55345 433 aa24.44■■□□□ 1.5
TMEM260-207ENST00000555497 GALNT3Q14435 633 aa24.44■■□□□ 1.5
TMEM260-207ENST00000555497 SH3RF2Q8TEC5 729 aa24.44■■□□□ 1.5
TMEM260-207ENST00000555497 IGSF21Q96ID5 467 aa24.44■■□□□ 1.5
TMEM260-207ENST00000555497 NACA2Q9H009 215 aa24.44■■□□□ 1.5
TMEM260-207ENST00000555497 RAP2CQ9Y3L5 183 aa24.44■■□□□ 1.5
TMEM260-207ENST00000555497 BACE2Q9Y5Z0 518 aa24.44■■□□□ 1.5
TMEM260-207ENST00000555497 A0A087X1B8 175 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 ZBTB14O43829 449 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 MAGEC1O60732 1142 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 PIRTP0C851 137 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 MYL4P12829 197 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 RAP1GDS1P52306 607 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 CSHL1Q14406 222 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 CFAP157Q5JU67 520 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 TMC7Q7Z402 723 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 TXNDC5Q8NBS9 432 aaKnown RBP24.43■■□□□ 1.5
TMEM260-207ENST00000555497 MFSD1Q9H3U5 465 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 ZDHHC2Q9UIJ5 367 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 MTF2Q9Y483 593 aaPredicted RBP24.43■■□□□ 1.5
TMEM260-207ENST00000555497 ARL5AQ9Y689 179 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 E9PBE3 544 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 MATN2O00339 956 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 KLHL41O60662 606 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 S1PR4O95977 384 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 SLC12A2P55011 1212 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 HECTD3Q5T447 861 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 FEM1CQ96JP0 617 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 TBATAQ96M53 351 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 CDK5RAP1Q96SZ6 601 aaKnown RBP24.43■■□□□ 1.5
TMEM260-207ENST00000555497 RNF38Q9H0F5 515 aa24.43■■□□□ 1.5
TMEM260-207ENST00000555497 MRPL46Q9H2W6 279 aaKnown RBP24.43■■□□□ 1.5
TMEM260-207ENST00000555497 NEMP2A6NFY4 417 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 GRID2O43424 1007 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 RGRP47804 291 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 SLC11A2P49281 568 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 CLCN5P51795 746 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 BLOC1S5Q8TDH9 187 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 VWCEQ96DN2 955 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 IFT43Q96FT9 208 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 PPP1R36Q96LQ0 422 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 SPON2Q9BUD6 331 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 OSBPL1AQ9BXW6 950 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 MAGEH1Q9H213 219 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 WDR55Q9H6Y2 383 aaPredicted RBP24.42■■□□□ 1.5
TMEM260-207ENST00000555497 MCM8Q9UJA3 840 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 COL4A6Q14031 1691 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 GOLGA8QA0A0J9YX86 632 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 GOLGA8OA6NCC3 632 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 GOLGA8NF8WBI6 632 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 STC2O76061 302 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 RPL14P50914 215 aaKnown RBP24.42■■□□□ 1.5
TMEM260-207ENST00000555497 PRKAA2P54646 552 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 TSNAXIP1Q2TAA8 658 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 HECTD2Q5U5R9 776 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 IL31Q6EBC2 164 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 RNF135Q8IUD6 432 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 SHKBP1Q8TBC3 707 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 DNAJC1Q96KC8 554 aaKnown RBP24.42■■□□□ 1.5
TMEM260-207ENST00000555497 FAM161BQ96MY7 647 aa24.42■■□□□ 1.5
TMEM260-207ENST00000555497 MRPL57Q9BQC6 102 aaKnown RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms