RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 COPG1Q9Y678 874 aaKnown RBP10.79□□□□□ -0.68
MTHFD1-210ENST00000555252 A0A1B0GTW7 788 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 TMEM247A6NEH6 219 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 AP3B1O00203 1094 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 NEMP1O14524 444 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 GABRDO14764 452 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 GIPC1O14908 333 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 C2P06681 752 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 DNAJB2P25686 324 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 TKTP29401 623 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 HALP42357 657 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 GRIA4P48058 902 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC5A3P53794 718 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 MPP1Q00013 466 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SCAPQ12770 1279 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 LRP8Q14114 963 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 PSMD5Q16401 504 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 BCL2A1Q16548 175 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 ANO4Q32M45 955 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 ARL13AQ5H913 290 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 MTX3Q5HYI7 312 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 OTUD1Q5VV17 481 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 STRA8Q7Z7C7 330 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 CMC1Q7Z7K0 106 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 MYO1HQ8N1T3 1032 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 TMEM86AQ8N2M4 240 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 LRRN4Q8WUT4 740 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SLCO4A1Q96BD0 722 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 LGMNQ99538 433 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 MED10Q9BTT4 135 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 C1orf50Q9BV19 199 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 NPLQ9BXD5 320 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 CXorf21Q9HAI6 301 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 ZNF358Q9NW07 568 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 GID8Q9NWU2 228 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC17A6Q9P2U8 582 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 CNOT6Q9ULM6 557 aaKnown RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SNX13Q9Y5W8 968 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 HTR3EA5X5Y0 456 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 TRIM43BA6NCK2 446 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 AQP12BA6NM10 295 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 H3BMQ9 156 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 DCLK1O15075 740 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 CHRNGP07510 517 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 LHX1P48742 406 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SESN2P58004 480 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SOX4Q06945 474 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 ARL13BQ3SXY8 428 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 ZNF618Q5T7W0 954 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 C8orf82Q6P1X6 216 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 FRA10AC1Q70Z53 315 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 AQP12AQ8IXF9 295 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 ZNF567Q8N184 647 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 CENPSQ8N2Z9 138 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 MINDY2Q8NBR6 621 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 CCNYQ8ND76 341 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 STYXQ8WUJ0 223 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 LPGAT1Q92604 370 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 PGAP3Q96FM1 320 aaPredicted RBP10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC45A3Q96JT2 553 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 COG8Q96MW5 612 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC29A1Q99808 456 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 C9orf16Q9BUW7 83 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 MAGEB5Q9BZ81 275 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 PRDM12Q9H4Q4 367 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 MAGEE1Q9HCI5 957 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 CNGB3Q9NQW8 809 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 CLEC11AQ9Y240 323 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 Q9Y3F1 56 aa10.78□□□□□ -0.68
MTHFD1-210ENST00000555252 C17orf102A2RUQ5 167 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 SULT1C4O75897 302 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 F9P00740 461 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 LTFP02788 710 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 MYL3P08590 195 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 ERVK-10P10266 1014 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 CDH3P22223 829 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 PSMB4P28070 264 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 ADRA1BP35368 520 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 HOXD12P35452 270 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 ATP4BP51164 291 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 KPNA2P52292 529 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 TMBIM6P55061 237 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 GALNT2Q10471 571 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 TUBA3CQ13748 450 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 SLC36A3Q495N2 470 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 NXNQ6DKJ4 435 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 HMBOX1Q6NT76 420 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 LINC00299Q6ZSB3 139 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 CLEC20AQ6ZU45 233 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 CCDC80Q76M96 950 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 PID1Q7Z2X4 250 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 TLK2Q86UE8 772 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 SCAIQ8N9R8 606 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 SMG8Q8ND04 991 aaKnown RBP10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 OR2T34Q8NGX1 318 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 OR2T3Q8NH03 318 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 SEPT8Q92599 483 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 ROPN1LQ96C74 230 aa10.77□□□□□ -0.69
MTHFD1-210ENST00000555252 PGBD4Q96DM1 585 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms