RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 NPIPB11E5RHQ5 1161 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 SEC14L5O43304 696 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 LIASO43766 372 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 ATG13O75143 517 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TSPAN9O75954 239 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 IPO7O95373 1038 aaKnown RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 CLDN7O95471 211 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TFPIP10646 304 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TM4SF1P30408 202 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 MMP13P45452 471 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 PIP4K2AP48426 406 aaPredicted RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 CLCN5P51795 746 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 CDH12P55289 794 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TMPRSS3P57727 454 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 SRSF1Q07955 248 aaKnown RBP eCLIP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 FAM27E3Q08E93 113 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 NIPAL4Q0D2K0 466 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 OLIG2Q13516 323 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 CUL4AQ13619 759 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 FRG1Q14331 258 aaKnown RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 FGFBP1Q14512 234 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 HSPB2Q16082 182 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TCTN1Q2MV58 587 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 MTX3Q5HYI7 312 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 ZNF626Q68DY1 528 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TMEM71Q6P5X7 295 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 SHC4Q6S5L8 630 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TSSK4Q6SA08 328 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TDRPQ86YL5 185 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 GPSM1Q86YR5 675 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 DHX40Q8IX18 779 aaKnown RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 RBFAQ8N0V3 343 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 ZCCHC9Q8N567 271 aaKnown RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 ARFGAP1Q8N6T3 406 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 CCDC89Q8N998 374 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TMEM163Q8TC26 289 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 SLC35F5Q8WV83 523 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 NSUN4Q96CB9 384 aaKnown RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 RSRC1Q96IZ7 334 aaKnown RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 MXRA8Q9BRK3 442 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 SH2D4AQ9H788 454 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 KAT14Q9H8E8 782 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 BPIFA1Q9NP55 256 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 SMYD2Q9NRG4 433 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 SLC6A13Q9NSD5 602 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TRNAU1APQ9NX07 287 aaKnown RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TUBA8Q9NY65 449 aaPredicted RBP5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 TBC1D29Q9UFV1 150 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 RUSC2Q8N2Y8 1516 aa5.64□□□□□ -1.51
CKS1BP1-201ENST00000555221 A0A0U1RQF3 1178 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 PTGES3LE9PB15 166 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 SNAP23O00161 211 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 VILLO15195 856 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 FGBP02675 491 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 KRT10P13645 584 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 DCTDP32321 178 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 PSMB10P40306 273 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 RASSF2P50749 326 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 ITGADQ13349 1161 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 LPIN1Q14693 890 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 SHBQ15464 509 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 DCAF6Q58WW2 860 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 RILPL1Q5EBL4 403 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 EPHA10Q5JZY3 1008 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 Q5PR19 223 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 PXDC1Q5TGL8 231 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 SRRM1Q8IYB3 904 aaKnown RBP5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 NME8Q8N427 588 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 TEX45Q8NA69 505 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 SNAPC3Q92966 411 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 TMEM18Q96B42 140 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 FBXL8Q96CD0 374 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 PABPC5Q96DU9 382 aaKnown RBP5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 MMABQ96EY8 250 aaPredicted RBP5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 WDR77Q9BQA1 342 aaPredicted RBP5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 FRMD4BQ9Y2L6 1034 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 ADAM18Q9Y3Q7 739 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 HS3ST3B1Q9Y662 390 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 A3GALT2U3KPV4 340 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 ZNF804BA4D1E1 1349 aa5.63□□□□□ -1.51
CKS1BP1-201ENST00000555221 A0A1W2PQF6 199 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 NDUFB8O95169 186 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 CHRNB2P17787 502 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 MYF6P23409 242 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 NANOS3P60323 173 aaKnown RBP5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 SSBP2P81877 361 aaPredicted RBP5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 MC1RQ01726 317 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 CREB5Q02930 508 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 GRIK3Q13003 919 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 CAPSQ13938 189 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 KCTD2Q14681 263 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 WTAPQ15007 396 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 ARHGEF6Q15052 776 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 ESCO2Q56NI9 601 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 MANEAQ5SRI9 462 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 PRAMEF19Q5SWL8 479 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 LRRC8EQ6NSJ5 796 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 KLHL35Q6PF15 583 aa5.62□□□□□ -1.51
CKS1BP1-201ENST00000555221 PARM1Q6UWI2 310 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms