RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 NOL4O94818 638 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MATN4O95460 622 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 GASTP01350 101 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 PIGRP01833 764 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 KRT10P13645 584 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 GABRG2P18507 467 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 CYP3A5P20815 502 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 FDXRP22570 491 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 CTSSP25774 331 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 PSMA5P28066 241 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 WASP42768 502 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 DHPSP49366 369 aaPredicted RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 CASP5P51878 434 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 SIM1P81133 766 aaPredicted RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MXRA7P84157 204 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 FOXF2Q12947 444 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MYBPC2Q14324 1141 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MTF1Q14872 753 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 SF3A1Q15459 793 aaKnown RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 C21orf62-AS1Q17RA5 79 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 TMEM119Q4V9L6 283 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 KCNT1Q5JUK3 1230 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 LMBRD2Q68DH5 695 aaPredicted RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 ANO7Q6IWH7 933 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 RHBDF2Q6PJF5 856 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 DSTYKQ6XUX3 929 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 FRMD7Q6ZUT3 714 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 TOGARAM2Q6ZUX3 1019 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 USP49Q70CQ1 688 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 CENPQQ7L2Z9 268 aaPredicted RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MON1AQ86VX9 555 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 CCDC83Q8IWF9 413 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 RHOT2Q8IXI1 618 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 YAF2Q8IY57 180 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 FAM177A1Q8N128 213 aaPredicted RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 TMEM132CQ8N3T6 1108 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 PDCL2Q8N4E4 241 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 CAMKK1Q8N5S9 505 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 ALLCQ8N6M5 410 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 SYT2Q8N9I0 419 aaPredicted RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 OR56A1Q8NGH5 318 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 OSCP1Q8WVF1 389 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 KBTBD7Q8WVZ9 684 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 KIFAP3Q92845 792 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MSANTD3Q96H12 275 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 CNOT6LQ96LI5 555 aaKnown RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 Q96MF0 132 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 REEP2Q9BRK0 252 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 PYM1Q9BRP8 204 aaKnown RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 DUSP26Q9BV47 211 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 GPR88Q9GZN0 384 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 TMEM9BQ9NQ34 198 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 TDP1Q9NUW8 608 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 SLC38A7Q9NVC3 462 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 KLHL11Q9NVR0 708 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 GTF3C4Q9UKN8 822 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MMP17Q9ULZ9 603 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 UBQLN1Q9UMX0 589 aaKnown RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MAGED2Q9UNF1 606 aaPredicted RBP3.36□□□□□ -1.87
SLIRP-202ENST00000553981 SLC8A2Q9UPR5 921 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 NEUROG3Q9Y4Z2 214 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 SHROOM3Q8TF72 1996 aa3.36□□□□□ -1.87
SLIRP-202ENST00000553981 MUC22E2RYF6 1773 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 NUMA1Q14980 2115 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 A0A087X0B3 334 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 IGHV1OR15-9A0A0B4J2B8 117 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 FAM149AA5PLN7 773 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CXorf49A8MYA2 514 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PRRT4C9JH25 899 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CLDN5O00501 218 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 GABRDO14764 452 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 OGTO15294 1046 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CLDN3O15551 220 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PJA2O43164 708 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 TLX3O43711 291 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 KDM1AO60341 852 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 RBMXL2O75526 392 aaKnown RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 BEST1O76090 585 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 KLF8O95600 359 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 APBB3O95704 486 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 OLFM2O95897 454 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 LPLP06858 475 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CLTAP09496 248 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PLA2G4BP0C869 781 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 DRD1P21728 446 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 MUTP22033 750 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ITPKBP27987 946 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 MARCKSP29966 332 aaPredicted RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CDC25CP30307 473 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CRHR1P34998 444 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 HOXD13P35453 343 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ALDH1A3P47895 512 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 LSSP48449 732 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 SCNN1BP51168 640 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF131P52739 623 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 EFNA5P52803 228 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 LGALS4P56470 323 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 CLRN1P58418 232 aa3.35□□□□□ -1.87
SLIRP-202ENST00000553981 PSMC1P62191 440 aaKnown RBP3.35□□□□□ -1.87
SLIRP-202ENST00000553981 OCRLQ01968 901 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms