RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 NEDD8-MDP1E9PL57 170 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 TULP3O75386 442 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 PMPCBO75439 489 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 KRT37O76014 449 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 KRT38O76015 456 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 PGLSO95336 258 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 CRTAMO95727 393 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 MT-CO1P00395 513 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 POLR2EP19388 210 aaKnown RBP10.97□□□□□ -0.65
PABPN1-203ENST00000553960 HMGCLP35914 325 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 NNMTP40261 264 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 VIPR2P41587 438 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 MAGEA12P43365 314 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 RGRP47804 291 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 DGKGP49619 791 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 RHOAP61586 193 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 MLLT1Q03111 559 aaPredicted RBP10.97□□□□□ -0.65
PABPN1-203ENST00000553960 RAD51Q06609 339 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 DLX2Q07687 328 aaPredicted RBP10.97□□□□□ -0.65
PABPN1-203ENST00000553960 SMAD4Q13485 552 aaKnown RBP10.97□□□□□ -0.65
PABPN1-203ENST00000553960 TAF1AQ15573 450 aaPredicted RBP10.97□□□□□ -0.65
PABPN1-203ENST00000553960 UGP2Q16851 508 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 LONRF1Q17RB8 773 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 SKIDA1Q1XH10 827 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 MYLK3Q32MK0 819 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 KBTBD12Q3ZCT8 623 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 DGKKQ5KSL6 1271 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 CERCAMQ5T4B2 595 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 UBAP2Q5T6F2 1119 aaKnown RBP10.97□□□□□ -0.65
PABPN1-203ENST00000553960 TSTD2Q5T7W7 516 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 TMEM215Q68D42 235 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 MBLAC2Q68D91 279 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 C22orf39Q6P5X5 142 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 BRAT1Q6PJG6 821 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 NUDT18Q6ZVK8 323 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 PPHLN1Q8NEY8 458 aaKnown RBP10.97□□□□□ -0.65
PABPN1-203ENST00000553960 IPMKQ8NFU5 416 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 USP33Q8TEY7 942 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 DNASE1L2Q92874 299 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 NSMCE3Q96MG7 304 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 TCF12Q99081 682 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 PAFAH2Q99487 392 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 FICDQ9BVA6 458 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 POMKQ9H5K3 350 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 IGFLR1Q9H665 355 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 ATP13A3Q9H7F0 1226 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 ELOVL2Q9NXB9 296 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.97□□□□□ -0.65
PABPN1-203ENST00000553960 DEC1Q9P2X7 70 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 SLC8A2Q9UPR5 921 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 ERVW-1Q9UQF0 538 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 MAD1L1Q9Y6D9 718 aa10.97□□□□□ -0.65
PABPN1-203ENST00000553960 F5P12259 2224 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 ZNF106Q9H2Y7 1883 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 IQANK1A0A1B0GTG1 560 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 PRPF4O43172 522 aaKnown RBP eCLIP10.96□□□□□ -0.655e-9■□□□□ 9.7
PABPN1-203ENST00000553960 SMAD6O43541 496 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 RRP9O43818 475 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 BANF1O75531 89 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 SNRPAP09012 282 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 CHRM1P11229 460 aaPredicted RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 NFKBIAP25963 317 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 ARNTP27540 789 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 OAS2P29728 719 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 GP5P40197 560 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 OPRD1P41143 372 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 GRIA2P42262 883 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 MSH2P43246 934 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 TNFRSF4P43489 277 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 SCNN1BP51168 640 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 ADARP55265 1226 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 SESN2P58004 480 aaPredicted RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 POLR2LP62875 67 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 SLC18A2Q05940 514 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 PTPRNQ16849 979 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 ITPRIPL2Q3MIP1 535 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 PUS10Q3MIT2 529 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 CARD16Q5EG05 197 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 TEDDM1Q5T9Z0 273 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 GRTP1Q5TC63 336 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 PRPF38BQ5VTL8 546 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 ZDHHC20Q5W0Z9 365 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 GRAMD4Q6IC98 578 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 GET4Q7L5D6 327 aaPredicted RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 ZNF354CQ86Y25 554 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 ANKMY2Q8IV38 441 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 TERB1Q8NA31 727 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 TMIEQ8NEW7 156 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 OR2W6PQ8NHA6 318 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 FAM76AQ8TAV0 307 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 PIH1D2Q8WWB5 315 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 IFT43Q96FT9 208 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 FCRL3Q96P31 734 aaPredicted RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 GAS2L1Q99501 681 aaPredicted RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 FAM167BQ9BTA0 163 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 TRMT61BQ9BVS5 477 aaKnown RBP10.96□□□□□ -0.65
PABPN1-203ENST00000553960 CDH19Q9H159 772 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 TMEM245Q9H330 911 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 MFSD1Q9H3U5 465 aa10.96□□□□□ -0.65
PABPN1-203ENST00000553960 CCDC134Q9H6E4 229 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms