RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 CCNB1P14635 433 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 CR2P20023 1033 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 CD38P28907 300 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 SUOXP51687 545 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 C21orf59P57076 290 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 PDK1Q15118 436 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 SLC45A4Q5BKX6 768 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 BRAT1Q6PJG6 821 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 ZSWIM9Q86XI8 627 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 SYCE1Q8N0S2 351 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 SKA1Q96BD8 255 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 FZD3Q9NPG1 666 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 TTLL3Q9Y4R7 772 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 SNX11Q9Y5W9 270 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 DOCK9Q9BZ29 2069 aa23.48■■□□□ 1.35
NEK9-203ENST00000553945 hCG_1818297A0A087WSY0 165 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 A0A1W2PR77 199 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 CCDC66A2RUB6 948 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 IGLON5A6NGN9 336 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 UPK3BL1B0FP48 263 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 UPK3BL2E5RIL1 263 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 PPP1R12AO14974 1030 aaPredicted RBP23.47■■□□□ 1.35
NEK9-203ENST00000553945 VILLO15195 856 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 CTNNA2P26232 953 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 PPIDQ08752 370 aaKnown RBP23.47■■□□□ 1.35
NEK9-203ENST00000553945 AP1B1Q10567 949 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 STAT4Q14765 748 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 UGP2Q16851 508 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 KIF19Q2TAC6 998 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 IL27RAQ6UWB1 636 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 PEX26Q7Z412 305 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 NT5DC3Q86UY8 548 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 SEMA3CQ99985 751 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 HEMGNQ9BXL5 484 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 SLC17A9Q9BYT1 436 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 TSGA10Q9BZW7 698 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 POLR1EQ9GZS1 481 aaKnown RBP23.47■■□□□ 1.35
NEK9-203ENST00000553945 PCDH12Q9NPG4 1184 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 HAUS2Q9NVX0 235 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 SAE1Q9UBE0 346 aaPredicted RBP23.47■■□□□ 1.35
NEK9-203ENST00000553945 AMFRQ9UKV5 643 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 CA5BQ9Y2D0 317 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 PCDHGC4Q9Y5F7 938 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 SPTBN4Q9H254 2564 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 CEP250Q9BV73 2442 aa23.47■■□□□ 1.35
NEK9-203ENST00000553945 KCNK1O00180 336 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 NRDCO43847 1150 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 OPHN1O60890 802 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 PAK4O96013 591 aaPredicted RBP23.46■■□□□ 1.35
NEK9-203ENST00000553945 WNT1P04628 370 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 HNRNPA2B1P22626 353 aaKnown RBP23.46■■□□□ 1.35
NEK9-203ENST00000553945 AKT2P31751 481 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 CCZ1BP86790 482 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 CCZ1P86791 482 aaPredicted RBP23.46■■□□□ 1.35
NEK9-203ENST00000553945 ADCY2Q08462 1091 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 ELP6Q0PNE2 266 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 SGCGQ13326 291 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 HLA-BQ31612 363 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 RALGPS1Q5JS13 557 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 ERAP2Q6P179 960 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 BZW1Q7L1Q6 419 aaKnown RBP23.46■■□□□ 1.35
NEK9-203ENST00000553945 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.46■■□□□ 1.35
NEK9-203ENST00000553945 CXorf40AQ8TE69 158 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 PDCD6IPQ8WUM4 868 aaKnown RBP23.46■■□□□ 1.35
NEK9-203ENST00000553945 ECHDC3Q96DC8 303 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 OLFM3Q96PB7 478 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 WRAP53Q9BUR4 548 aaKnown RBP23.46■■□□□ 1.35
NEK9-203ENST00000553945 GAREM1Q9H706 876 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 AMACRQ9UHK6 382 aa23.46■■□□□ 1.35
NEK9-203ENST00000553945 DCDC2BA2VCK2 349 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 KRT86O43790 486 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 CER1O95813 267 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 FTCDO95954 541 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 JCHAINP01591 159 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 PRKCGP05129 697 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 PECAM1P16284 738 aaPredicted RBP23.45■■□□□ 1.34
NEK9-203ENST00000553945 TGM2P21980 687 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 NR2C2P49116 596 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 PEX5P50542 639 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 RWDD2BP57060 319 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 COPS2P61201 443 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 POLR2LP62875 67 aaKnown RBP23.45■■□□□ 1.34
NEK9-203ENST00000553945 SEMG2Q02383 582 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 FGL2Q14314 439 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 PPP2R5EQ16537 467 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 B4GALNT4Q76KP1 1039 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 ZSCAN30Q86W11 494 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 RNF10Q8N5U6 811 aaKnown RBP23.45■■□□□ 1.34
NEK9-203ENST00000553945 MFSD2AQ8NA29 543 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 IL21RQ9HBE5 538 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 DNAAF2Q9NVR5 837 aaKnown RBP23.45■■□□□ 1.34
NEK9-203ENST00000553945 GUCA1BQ9UMX6 200 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 ATP8A1Q9Y2Q0 1164 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 CAPN6Q9Y6Q1 641 aa23.45■■□□□ 1.34
NEK9-203ENST00000553945 TP53BP1Q12888 1972 aaPredicted RBP23.45■■□□□ 1.34
NEK9-203ENST00000553945 CACNA1EQ15878 2313 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 TRPM6Q9BX84 2022 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 TLR4O00206 839 aa23.44■■□□□ 1.34
NEK9-203ENST00000553945 TRAFD1O14545 582 aaPredicted RBP23.44■■□□□ 1.34
NEK9-203ENST00000553945 KCNK3O14649 394 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms