RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 CCDC68Q9H2F9 335 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 EPS8L2Q9H6S3 715 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 ZCCHC17Q9NP64 241 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 TM7SF3Q9NS93 570 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 ZDHHC7Q9NXF8 308 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 NSMCE4AQ9NXX6 385 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 ADD3Q9UEY8 706 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 TBC1D29Q9UFV1 150 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 SRP68Q9UHB9 627 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 CA14Q9ULX7 337 aa2.45□□□□□ -2.02
SRP54-204ENST00000553923 RRP7AQ9Y3A4 280 aaKnown RBP2.45□□□□□ -2.02
SRP54-204ENST00000553923 A0A087X0M5 115 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 A0A1B0GX30 115 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 BICDL2A1A5D9 508 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 LINC01553A4QN01 128 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 C3orf70A6NLC5 250 aaPredicted RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 MCIDASD6RGH6 385 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 M0QYT0 321 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 XPNPEP2O43895 674 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 DHX16O60231 1041 aaKnown RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 DOK2O60496 412 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 ACTL6BO94805 426 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 BAG4O95429 457 aaKnown RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 CER1O95813 267 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 TBX6O95947 436 aaPredicted RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 CTNNA1P35221 906 aaKnown RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 AVPR1AP37288 418 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 CCR9P51686 369 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 PLIN5Q00G26 463 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 TLE3Q04726 772 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 CUL4AQ13619 759 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 RPS6KA2Q15349 733 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 CDC37Q16543 378 aaPredicted RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 LCE3AQ5TA76 89 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 SLC9C2Q5TAH2 1124 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 ACAD10Q6JQN1 1059 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 TMEM88Q6PEY1 159 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 SLC22A25Q6T423 547 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 SYNE3Q6ZMZ3 975 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 NEK10Q6ZWH5 1172 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 EXOC3L1Q86VI1 746 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 TMEM217Q8N7C4 229 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 ARL10Q8N8L6 244 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 LRRC57Q8N9N7 239 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 WDSUB1Q8N9V3 476 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 ZNF485Q8NCK3 441 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 CCDC191Q8NCU4 936 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 TMEM163Q8TC26 289 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 STT3BQ8TCJ2 826 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 SORCS1Q8WY21 1168 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 ST8SIA4Q92187 359 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 C3orf49Q96BT1 292 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 UHRF2Q96PU4 802 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 TRAPPC9Q96Q05 1148 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 YME1L1Q96TA2 773 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 SLF1Q9BQI6 1058 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 SIL1Q9H173 461 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 MMP28Q9H239 520 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 ACAD9Q9H845 621 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 CHODLQ9H9P2 273 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 NECTIN3Q9NQS3 549 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 EIF2B3Q9NR50 452 aaKnown RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 CFDP1Q9UEE9 299 aaPredicted RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 HERC5Q9UII4 1024 aaKnown RBP2.44□□□□□ -2.02
SRP54-204ENST00000553923 RPS6KA6Q9UK32 745 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 PCDHGB4Q9UN71 923 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 CNPY2Q9Y2B0 182 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 DTNAQ9Y4J8 743 aa2.44□□□□□ -2.02
SRP54-204ENST00000553923 IGLV5-37A0A075B6J1 123 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 CCDC196A0A1B0GTZ2 297 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 PI4KAP2A4QPH2 592 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 MAGEA13PA6NCF6 341 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 SAC3D1A6NKF1 404 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 PCDH17O14917 1159 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 USO1O60763 962 aaKnown RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 GLP2RO95838 553 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 CYP3A4P08684 503 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 CLTBP09497 229 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 PEPDP12955 493 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 UNGP13051 313 aaPredicted RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 ALOX12P18054 663 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 GRK5P34947 590 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 GGT5P36269 586 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 UBA7P41226 1012 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 PAFAH1B1P43034 410 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 TAS2R50P59544 299 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 ACTR2P61160 394 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 AP2B1P63010 937 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 TLE2Q04725 743 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 CALD1Q05682 793 aaKnown RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 LRMPQ12912 555 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 DMP1Q13316 513 aaPredicted RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 PPP2R5CQ13362 524 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 SNTA1Q13424 505 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 TDGQ13569 410 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 GRM4Q14833 912 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 PLK5Q496M5 336 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 ARL13AQ5H913 290 aaPredicted RBP2.43□□□□□ -2.02
SRP54-204ENST00000553923 EFHC1Q5JVL4 640 aa2.43□□□□□ -2.02
SRP54-204ENST00000553923 ATPAF1Q5TC12 328 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms