RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 LNP1A1A4G5 178 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 GOLGA6L9A6NEM1 432 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 UPK3BL1B0FP48 263 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 UPK3BL2E5RIL1 263 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 NEMP1O14524 444 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 RIOK3O14730 519 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 VILLO15195 856 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 DDX3YO15523 660 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 DFNA5O60443 496 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 MAP3K6O95382 1288 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 PIGNO95427 931 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 JCHAINP01591 159 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 CFIP05156 583 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 PTMAP06454 111 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 PYGMP11217 842 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 RPL26P61254 145 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 DYNLT1P63172 113 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 ITKQ08881 620 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 SGCGQ13326 291 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 STAT4Q14765 748 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 NUMA1Q14980 2115 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 PRKD1Q15139 912 aaPredicted RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 RPS6KA1Q15418 735 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 SF3A2Q15428 464 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 SLC14A2Q15849 920 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 ZNF284Q2VY69 593 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 AASDHQ4L235 1098 aaPredicted RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 TMEM259Q4ZIN3 620 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 TEX44Q53QW1 395 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 CCDC181Q5TID7 509 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 DCP2Q8IU60 420 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 ZCCHC9Q8N567 271 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 MFSD2AQ8NA29 543 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 SNX19Q92543 992 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 ALG3Q92685 438 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 HAUS1Q96CS2 278 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 SEMA3CQ99985 751 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 C1QTNF7Q9BXJ2 289 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 C1QTNF2Q9BXJ5 285 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 SLC17A9Q9BYT1 436 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 EBF2Q9HAK2 575 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 NOD2Q9HC29 1040 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 TM9SF3Q9HD45 589 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 KCTD5Q9NXV2 234 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 PHTF1Q9UMS5 762 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 RPL26L1Q9UNX3 145 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 PPIL1Q9Y3C6 166 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 CAPN6Q9Y6Q1 641 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 NYNRINQ9P2P1 1898 aaKnown RBP9.42□□□□□ -0.9
CHD8-206ENST00000553870 VPS13AQ96RL7 3174 aa9.42□□□□□ -0.9
CHD8-206ENST00000553870 USP34Q70CQ2 3546 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 GVINP1Q7Z2Y8 2422 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 TNRC6BQ9UPQ9 1833 aaKnown RBP9.41□□□□□ -0.9
CHD8-206ENST00000553870 PATE3B3GLJ2 98 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 TOR1BO14657 336 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 TM7SF2O76062 418 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 PGLSO95336 258 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 FTCDO95954 541 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ENGP17813 658 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 HNRNPA2B1P22626 353 aaKnown RBP9.41□□□□□ -0.9
CHD8-206ENST00000553870 CD38P28907 300 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 AKT2P31751 481 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ABL2P42684 1182 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ATXN3P54252 364 aaPredicted RBP9.41□□□□□ -0.9
CHD8-206ENST00000553870 MAXP61244 160 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 PPP2CBP62714 309 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 PPP2CAP67775 309 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ADCY2Q08462 1091 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 SLC14A1Q13336 389 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 AGERQ15109 404 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 CCDC6Q16204 474 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ARMC12Q5T9G4 340 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 MEI1Q5TIA1 1274 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 NPNTQ6UXI9 565 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 RAVER1Q8IY67 606 aaKnown RBP9.41□□□□□ -0.9
CHD8-206ENST00000553870 PAF1Q8N7H5 531 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 CNTD1Q8N815 330 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 TMEM145Q8NBT3 493 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 DENND6BQ8NEG7 585 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ARRDC2Q8TBH0 407 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 CXorf40AQ8TE69 158 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 SERAC1Q96JX3 654 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 TEKT5Q96M29 485 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 HEMGNQ9BXL5 484 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 FRMD8P1Q9BZ68 369 aaPredicted RBP9.41□□□□□ -0.9
CHD8-206ENST00000553870 SLC25A51Q9H1U9 297 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 SMOC1Q9H4F8 434 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ERVMER34-1Q9H9K5 563 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 PCDH12Q9NPG4 1184 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 TMEM9BQ9NQ34 198 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 LZTFL1Q9NQ48 299 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 SAE1Q9UBE0 346 aaPredicted RBP9.41□□□□□ -0.9
CHD8-206ENST00000553870 TRHDEQ9UKU6 1024 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ZFR2Q9UPR6 939 aaKnown RBP9.41□□□□□ -0.9
CHD8-206ENST00000553870 ANKRD6Q9Y2G4 727 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 PCDHGC4Q9Y5F7 938 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 RAI2Q9Y5P3 530 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.41□□□□□ -0.9
CHD8-206ENST00000553870 PI4KAP42356 2102 aa9.41□□□□□ -0.9
CHD8-206ENST00000553870 ATXN2Q99700 1313 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms