RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 NIPAL4Q0D2K0 466 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 TRAF2Q12933 501 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 SNX1Q13596 522 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 PRPSAP1Q14558 356 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 UGP2Q16851 508 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 NEK5Q6P3R8 708 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 ZNF567Q8N184 647 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 ARRDC2Q8TBH0 407 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 C1orf54Q8WWF1 131 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 ECHDC3Q96DC8 303 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 IMP4Q96G21 291 aaKnown RBP13.96□□□□□ -0.17
TUBB3-202ENST00000553656 PPP1R2P1Q96PQ5 205 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 HINFPQ9BQA5 517 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 ZNF148Q9UQR1 794 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 PCDHB9Q9Y5E1 797 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 FADS3Q9Y5Q0 445 aa13.96□□□□□ -0.17
TUBB3-202ENST00000553656 TRAFD1O14545 582 aaPredicted RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 HTRA2O43464 458 aaPredicted RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 TSPAN6O43657 245 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 OPHN1O60890 802 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 RNGTTO60942 597 aaKnown RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 PGLSO95336 258 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 TIMP2P16035 220 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 NFKB1P19838 968 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 CASQ1P31415 396 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 STIP1P31948 543 aaKnown RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ACTN2P35609 894 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ABL2P42684 1182 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 PTGER3P43115 390 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 CCR5P51681 352 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 TAS2R38P59533 333 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ETF1P62495 437 aaKnown RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 SKOR1P84550 965 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 CCNG2Q16589 344 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 LRRC73Q5JTD7 316 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ANKRD20A2Q5SQ80 823 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ANKRD20A1Q5TYW2 823 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ANKRD20A3Q5VUR7 823 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 KIAA1161Q6NSJ0 714 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 CCDC70Q6NSX1 233 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ARHGEF18Q6ZSZ5 1173 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 USP45Q70EL2 814 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 PRPF39Q86UA1 669 aaKnown RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ZSCAN30Q86W11 494 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 SLC41A1Q8IVJ1 513 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 RASGEF1CQ8N431 466 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 FAM71DQ8N9W8 422 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 SUMF1Q8NBK3 374 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 CXorf40AQ8TE69 158 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 COG1Q8WTW3 980 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 PIGKQ92643 395 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 BIRC7Q96CA5 298 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 LRRC45Q96CN5 670 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 IFT43Q96FT9 208 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 FEM1CQ96JP0 617 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 SPATA13Q96N96 652 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.184e-8■□□□□ 11
TUBB3-202ENST00000553656 TMEM121Q9BTD3 319 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 TDRD1Q9BXT4 1180 aaKnown RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ADGRE3Q9BY15 652 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 MIR1-1HGQ9H1L0 117 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 GBA3Q9H227 469 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 PCDH9Q9HC56 1237 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 PCDH12Q9NPG4 1184 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 TTC7AQ9ULT0 858 aaPredicted RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 PHTF1Q9UMS5 762 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.95□□□□□ -0.18
TUBB3-202ENST00000553656 PCDHGA5Q9Y5G8 931 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 SAR1BQ9Y6B6 198 aa13.95□□□□□ -0.18
TUBB3-202ENST00000553656 THADAQ6YHU6 1953 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 A0A1W2PQU0 124 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 GOLGA6CA6NDK9 693 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 GOLGA6BA6NDN3 693 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 ANXA9O76027 345 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 EPN2O95208 641 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 RETP07949 1114 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 GOLGA6DP0CG33 693 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 GNSP15586 552 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 PRLRP16471 622 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
TUBB3-202ENST00000553656 NUDT1P36639 197 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 RPL26P61254 145 aaKnown RBP13.94□□□□□ -0.18
TUBB3-202ENST00000553656 RPS21P63220 83 aaKnown RBP13.94□□□□□ -0.18
TUBB3-202ENST00000553656 FAM193AP78312 1265 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 SLC14A2Q15849 920 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 PCSK7Q16549 785 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 SETMARQ53H47 684 aaPredicted RBP13.94□□□□□ -0.18
TUBB3-202ENST00000553656 PAPD7Q5XG87 772 aaKnown RBP13.94□□□□□ -0.18
TUBB3-202ENST00000553656 RABEPKQ7Z6M1 372 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 TRIM69Q86WT6 500 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 HORMAD1Q86X24 394 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 CCDC89Q8N998 374 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 LPCAT1Q8NF37 534 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 CCDC110Q8TBZ0 833 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 ACTRT1Q8TDG2 376 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 VOPP1Q96AW1 172 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 FCRL5Q96RD9 977 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 USP29Q9HBJ7 922 aa13.94□□□□□ -0.18
TUBB3-202ENST00000553656 VPS45Q9NRW7 570 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms