RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ALDH4A1P30038 563 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 CSTF2P33240 577 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRPF39-204ENST00000553605 NME3Q13232 169 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 TRA2AQ13595 282 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRPF39-204ENST00000553605 LRRC14Q15048 493 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 CLPPQ16740 277 aaPredicted RBP13.96□□□□□ -0.17
PRPF39-204ENST00000553605 DCAF12Q5T6F0 453 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 RESP18Q5W5W9 173 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 TFAP2DQ7Z6R9 452 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 TMEM110Q86TL2 294 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 IRF2BP1Q8IU81 584 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 UNC5BQ8IZJ1 945 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 NLGN4XQ8N0W4 816 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 NLGN4YQ8NFZ3 816 aaPredicted RBP13.96□□□□□ -0.17
PRPF39-204ENST00000553605 OR6K2Q8NGY2 324 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 ATL2Q8NHH9 583 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 APOOQ9BUR5 198 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 TM6SF2Q9BZW4 377 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 INTS2Q9H0H0 1204 aaKnown RBP13.96□□□□□ -0.17
PRPF39-204ENST00000553605 CASS4Q9NQ75 786 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 KCTD3Q9Y597 815 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 KCNMB2Q9Y691 235 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 DGKBQ9Y6T7 804 aa13.96□□□□□ -0.17
PRPF39-204ENST00000553605 RP1L1Q8IWN7 2480 aaPredicted RBP13.95□□□□□ -0.18
PRPF39-204ENST00000553605 ZW10O43264 779 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 OR1E1P30953 314 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 COPB1P53618 953 aaKnown RBP13.95□□□□□ -0.18
PRPF39-204ENST00000553605 LIMK2P53671 638 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 ARF5P84085 180 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 INPP5AQ14642 412 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 CRTC2Q53ET0 693 aaPredicted RBP13.95□□□□□ -0.18
PRPF39-204ENST00000553605 LRRC73Q5JTD7 316 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 ATP1A1-AS1Q5TC04 95 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 KCTD16Q68DU8 428 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 SPECC1LQ69YQ0 1117 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 DENND1BQ6P3S1 775 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 PLPP6Q8IY26 295 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 NRSN1Q8IZ57 195 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 GUF1Q8N442 669 aaKnown RBP13.95□□□□□ -0.18
PRPF39-204ENST00000553605 STARD8Q92502 1023 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 WDR92Q96MX6 357 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 KLHL32Q96NJ5 620 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 SLC2A13Q96QE2 648 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 WRAP53Q9BUR4 548 aaKnown RBP13.95□□□□□ -0.18
PRPF39-204ENST00000553605 OCIAD1Q9NX40 245 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 PCDHA7Q9UN72 937 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 OR1A2Q9Y585 309 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 ACTL7AQ9Y615 435 aa13.95□□□□□ -0.18
PRPF39-204ENST00000553605 ILVBLA1L0T0 632 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 DRGXA6NNA5 263 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 RHPN2P1A8MT19 583 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 KRIT1O00522 736 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 CETN3O15182 167 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 RHOBTB3O94955 611 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 MYL1P05976 194 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 UGT2B4P06133 528 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 ITIH2P19823 946 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 CD1CP29017 333 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 RAB15P59190 212 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 WSCD2Q2TBF2 565 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 C1QL3Q5VWW1 255 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 ANKS6Q68DC2 871 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 FAM129CQ86XR2 697 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 ZNF683Q8IZ20 524 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 KAT5Q92993 513 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
PRPF39-204ENST00000553605 ISG20Q96AZ6 181 aaKnown RBP13.94□□□□□ -0.18
PRPF39-204ENST00000553605 PDXPQ96GD0 296 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 OSBPL1AQ9BXW6 950 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 SPRY4Q9C004 299 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 ATP13A1Q9HD20 1204 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 MPP6Q9NZW5 540 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 SNX10Q9Y5X0 201 aa13.94□□□□□ -0.18
PRPF39-204ENST00000553605 ESPL1Q14674 2120 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 B4E171 279 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 POP4O95707 220 aaKnown RBP13.93□□□□□ -0.18
PRPF39-204ENST00000553605 CD160O95971 181 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 GLI1P08151 1106 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 TIMP2P16035 220 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 TSPAN7P41732 249 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 ME1P48163 572 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 ABHD18Q0P651 414 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 EIF2S3LQ2VIR3 472 aaKnown RBP13.93□□□□□ -0.18
PRPF39-204ENST00000553605 LRRC31Q6UY01 552 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 ZNF783Q6ZMS7 281 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 KDELC2Q7Z4H8 507 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 ZNF438Q7Z4V0 828 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 OR4D9Q8NGE8 314 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 OR1E3Q8WZA6 343 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 VOPP1Q96AW1 172 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 NT5C1BQ96P26 610 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 TEFMQ96QE5 360 aaKnown RBP13.93□□□□□ -0.18
PRPF39-204ENST00000553605 TKTL2Q9H0I9 626 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 TMEM168Q9H0V1 697 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 DONSONQ9NYP3 566 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 COQ6Q9Y2Z9 468 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 LRP4O75096 1905 aa13.93□□□□□ -0.18
PRPF39-204ENST00000553605 POLQO75417 2590 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms