RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 LSM7Q9UK45 103 aaKnown RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 CORO1CQ9ULV4 474 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 MTO1Q9Y2Z2 717 aaKnown RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 INSL6Q9Y581 213 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 INSL5Q9Y5Q6 135 aa7.39□□□□□ -1.23
ATXN3-221ENST00000553498 GPC6Q9Y625 555 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 MRPL42Q9Y6G3 142 aaKnown RBP7.39□□□□□ -1.23
ATXN3-221ENST00000553498 HTTP42858 3142 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 HMX2A2RU54 273 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 TRIM43BA6NCK2 446 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CFAP73A6NFT4 308 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 FOXO6A8MYZ6 492 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 H3BNC9 293 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 MYO1CO00159 1063 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 SLC7A4O43246 635 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 USP12O75317 370 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 STC2O76061 302 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 FGF18O76093 207 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CNTN5O94779 1100 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 GJB5O95377 273 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 FGBP02675 491 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 ALDOAP04075 364 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 BPGMP07738 259 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 RHOCP08134 193 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 SERPINF2P08697 491 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 FAM157BP0CG42 384 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 ERVK-10P10266 1014 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CSF2RAP15509 400 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 DDX6P26196 483 aaKnown RBP eCLIP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CRABP2P29373 138 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CDC25CP30307 473 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CORO1AP31146 461 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 SLC26A3P40879 764 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 MAPK8P45983 427 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 MAP2K3P46734 347 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 RASSF2P50749 326 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 HK2P52789 917 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CRADDP78560 199 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 SLC7A9P82251 487 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 UBE3AQ05086 875 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 ACTN3Q08043 901 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 SLC10A7Q0GE19 358 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 TWF1Q12792 350 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 ASPHQ12797 758 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 THOC5Q13769 683 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 TSNAXIP1Q2TAA8 658 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 INO80DQ53TQ3 878 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 HSP90AA5PQ58FG0 334 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 FAM133BQ5BKY9 247 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CERCAMQ5T4B2 595 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 PSRC1Q6PGN9 363 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 NUDCD3Q8IVD9 361 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 FAM217AQ8IXS0 508 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 FIBCD1Q8N539 461 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CCDC63Q8NA47 563 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 LEMD2Q8NC56 503 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 HJURPQ8NCD3 748 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 SPATA22Q8NHS9 363 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 ARRDC2Q8TBH0 407 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 USP33Q8TEY7 942 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 DIS3LQ8TF46 1054 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 MRPS31Q92665 395 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 E2F7Q96AV8 911 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 TRIM43Q96BQ3 446 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 PABPC5Q96DU9 382 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 IFT43Q96FT9 208 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 FCRL3Q96P31 734 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 GCNAQ96QF7 691 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 GPR22Q99680 433 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 MGME1Q9BQP7 344 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 TSSK1BQ9BXA7 367 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 ACE2Q9BYF1 805 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 ZBP1Q9H171 429 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 MTIF3Q9H2K0 278 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 RASSF4Q9H2L5 321 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 STN1Q9H668 368 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 TRPC7Q9HCX4 862 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 MLXIPLQ9NP71 852 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 NT5MQ9NPB1 228 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 CHRAC1Q9NRG0 131 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 SNX15Q9NRS6 342 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 TREX1Q9NSU2 369 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 UBA2Q9UBT2 640 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 PRKAG2Q9UGJ0 569 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 DPP7Q9UHL4 492 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 TLK1Q9UKI8 766 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 AGO1Q9UL18 857 aaKnown RBP7.38□□□□□ -1.23
ATXN3-221ENST00000553498 ZMIZ1Q9ULJ6 1067 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
ATXN3-221ENST00000553498 A0A087X1B8 175 aa7.37□□□□□ -1.23
ATXN3-221ENST00000553498 MROH6A6NGR9 719 aa7.37□□□□□ -1.23
ATXN3-221ENST00000553498 F5H423 210 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-221ENST00000553498 GOLGA8RI6L899 631 aa7.37□□□□□ -1.23
ATXN3-221ENST00000553498 J3KR12 359 aa7.37□□□□□ -1.23
ATXN3-221ENST00000553498 TPP1O14773 563 aa7.37□□□□□ -1.23
ATXN3-221ENST00000553498 TEX28O15482 410 aa7.37□□□□□ -1.23
ATXN3-221ENST00000553498 DNAJC6O75061 913 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms