RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ITGAVP06756 1048 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 THEGLP0DJG4 465 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 CDC25BP30305 580 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 MMP13P45452 471 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 RABIFP47224 123 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 SIM1P81133 766 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-204ENST00000553324 TMEM52BQ4KMG9 183 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 ABI3BPQ7Z7G0 1075 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 CPNE8Q86YQ8 564 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 CAMK1DQ8IU85 385 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 TXLNBQ8N3L3 684 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 TEX26Q8N6G2 289 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 DENND6BQ8NEG7 585 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 RHBDD1Q8TEB9 315 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 ECHDC3Q96DC8 303 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 IFT43Q96FT9 208 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 NUDCD1Q96RS6 583 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 MGME1Q9BQP7 344 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 SCUBE2Q9NQ36 999 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 KLHL11Q9NVR0 708 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 PCOLCE2Q9UKZ9 415 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 ALG6Q9Y672 507 aa15.48■□□□□ 0.07
SHMT2-204ENST00000553324 CNOT1A5YKK6 2376 aaKnown RBP15.47■□□□□ 0.07
SHMT2-204ENST00000553324 RIOK3O14730 519 aaKnown RBP15.47■□□□□ 0.07
SHMT2-204ENST00000553324 PSTPIP1O43586 416 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 CBFA2T3O75081 653 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 COMTP21964 271 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 RGRP47804 291 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 Q6ZSR6 202 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 BZW1Q7L1Q6 419 aaKnown RBP15.47■□□□□ 0.07
SHMT2-204ENST00000553324 GLRX5Q86SX6 157 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 PQLC3Q8N755 202 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 SPOCK2Q92563 424 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 BAG1Q99933 345 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-204ENST00000553324 PCDH12Q9NPG4 1184 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 ATP8A1Q9Y2Q0 1164 aa15.47■□□□□ 0.07
SHMT2-204ENST00000553324 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.47■□□□□ 0.07
SHMT2-204ENST00000553324 ASCC3Q8N3C0 2202 aaKnown RBP15.47■□□□□ 0.07
SHMT2-204ENST00000553324 SOWAHDA6NJG2 315 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 TRAFD1O14545 582 aaPredicted RBP15.46■□□□□ 0.07
SHMT2-204ENST00000553324 APOL1O14791 398 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 MUSKO15146 869 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 MFSD11O43934 449 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 MMP20O60882 483 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 NEBLO76041 1014 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 CR2P20023 1033 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 PTK2BQ14289 1009 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 FGL2Q14314 439 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 KYAT3Q6YP21 454 aaKnown RBP15.46■□□□□ 0.07
SHMT2-204ENST00000553324 SPATS2Q86XZ4 545 aaKnown RBP15.46■□□□□ 0.07
SHMT2-204ENST00000553324 NDUFAF2Q8N183 169 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 CCNYQ8ND76 341 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 SAP25Q8TEE9 199 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 MAML1Q92585 1016 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 CENPTQ96BT3 561 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 HDAC11Q96DB2 347 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 BMFQ96LC9 184 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 CAMK1GQ96NX5 476 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 MYOCQ99972 504 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 POLR1EQ9GZS1 481 aaKnown RBP15.46■□□□□ 0.07
SHMT2-204ENST00000553324 BRD8Q9H0E9 1235 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 FZD3Q9NPG1 666 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 ITM2BQ9Y287 266 aa15.46■□□□□ 0.07
SHMT2-204ENST00000553324 C3orf70A6NLC5 250 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-204ENST00000553324 BTNL10A8MVZ5 291 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 SPINT1O43278 529 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 HTRA2O43464 458 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-204ENST00000553324 KRT1P04264 644 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 KRT10P13645 584 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 CCNB1P14635 433 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 PMLP29590 882 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 NR2C2P49116 596 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 CLDN2P57739 230 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 YPEL5P62699 121 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 SHC2P98077 582 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 GBE1Q04446 702 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 ITKQ08881 620 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 TFDP2Q14188 446 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 PDK1Q15118 436 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 PRAMEF14Q5SWL7 426 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 SLC9A4Q6AI14 798 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 C11orf63Q6NUN7 778 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 GCNT7Q6ZNI0 430 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 OR13H1Q8NG92 308 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 KLF6Q99612 283 aaPredicted RBP15.45■□□□□ 0.06
SHMT2-204ENST00000553324 NOD2Q9HC29 1040 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 NT5MQ9NPB1 228 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 RBM22Q9NW64 420 aaKnown RBP eCLIP15.45■□□□□ 0.061e-9■■■■□ 20
SHMT2-204ENST00000553324 KCTD5Q9NXV2 234 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 DTLQ9NZJ0 730 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 GGT7Q9UJ14 662 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 ANGPTL2Q9UKU9 493 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 PHTF1Q9UMS5 762 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 APOBEC2Q9Y235 224 aaKnown RBP15.45■□□□□ 0.06
SHMT2-204ENST00000553324 CA5BQ9Y2D0 317 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 KNL1Q8NG31 2342 aa15.45■□□□□ 0.06
SHMT2-204ENST00000553324 NYNRINQ9P2P1 1898 aaKnown RBP15.44■□□□□ 0.06
SHMT2-204ENST00000553324 SPAARA0A1B0GVQ0 90 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 POM121BA6NF01 834 aa15.44■□□□□ 0.06
SHMT2-204ENST00000553324 PPP1R12AO14974 1030 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms