RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 SRSF1Q07955 248 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATXN3-218ENST00000553309 CCDC57Q2TAC2 916 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 GLE1Q53GS7 698 aaKnown RBP5.35□□□□□ -1.55
ATXN3-218ENST00000553309 DHRS13Q6UX07 377 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 PIM3Q86V86 326 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 FAM186BQ8IYM0 893 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 DCLK2Q8N568 766 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 ASB12Q8WXK4 309 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 PABPC5Q96DU9 382 aaKnown RBP5.35□□□□□ -1.55
ATXN3-218ENST00000553309 GPR78Q96P69 363 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 MOV10Q9HCE1 1003 aaKnown RBP5.35□□□□□ -1.55
ATXN3-218ENST00000553309 B3GNT3Q9Y2A9 372 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 SCN5AQ14524 2016 aa5.35□□□□□ -1.55
ATXN3-218ENST00000553309 ROBO3Q96MS0 1386 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 EMSYQ7Z589 1322 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 KIF16BQ96L93 1317 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 LINC01553A4QN01 128 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 C19orf81C9J6K1 198 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 NTN1O95631 604 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 CER1O95813 267 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 ANXA6P08133 673 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 ITGA5P08648 1049 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 ACTN1P12814 892 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 ABCB4P21439 1286 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 BTDP43251 543 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 TBX4P57082 545 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 B4GALNT1Q00973 533 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 BEX3Q00994 111 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 GRM4Q14833 912 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 ANXA2RQ3ZCQ2 193 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 CXCL17Q6UXB2 119 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 G2E3Q7L622 706 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 RHPN2Q8IUC4 686 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 SYTL1Q8IYJ3 562 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 ARL14EPQ8N8R7 260 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-218ENST00000553309 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 DEPTORQ8TB45 409 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 NSMCE1Q8WV22 266 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 NPIPB3Q92617 1050 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 FRAT1Q92837 279 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-218ENST00000553309 MUL1Q969V5 352 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 C18orf8Q96DM3 657 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 SGCZQ96LD1 299 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 FAM210AQ96ND0 272 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 TGS1Q96RS0 853 aaKnown RBP5.34□□□□□ -1.55
ATXN3-218ENST00000553309 PAAF1Q9BRP4 392 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 TUBB6Q9BUF5 446 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 FTOQ9C0B1 505 aaKnown RBP eCLIP5.34□□□□□ -1.55
ATXN3-218ENST00000553309 IGSF9Q9P2J2 1179 aa5.34□□□□□ -1.55
ATXN3-218ENST00000553309 IPO11Q9UI26 975 aaKnown RBP5.34□□□□□ -1.55
ATXN3-218ENST00000553309 UBE2J1Q9Y385 318 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-218ENST00000553309 MYO7AQ13402 2215 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 GCN1Q92616 2671 aaKnown RBP5.33□□□□□ -1.56
ATXN3-218ENST00000553309 PTPRSQ13332 1948 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 NAV2Q8IVL1 2488 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 H3BNX3 289 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 PIP5K1BO14986 540 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 PRPF4O43172 522 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATXN3-218ENST00000553309 TBX10O75333 385 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 TULP3O75386 442 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 GLP2RO95838 553 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 PSG1P11464 419 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 TMPOP42166 694 aaKnown RBP5.33□□□□□ -1.56
ATXN3-218ENST00000553309 PSMC6P62333 389 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 DEFB103AP81534 67 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 DMWDQ09019 674 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 FHL1Q13642 323 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 LRRC24Q50LG9 513 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 MANEAQ5SRI9 462 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 LIPMQ5VYY2 423 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 COLCA1Q6ZS62 124 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 NOL8Q76FK4 1167 aaKnown RBP5.33□□□□□ -1.56
ATXN3-218ENST00000553309 MMP21Q8N119 569 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 ACRBPQ8NEB7 543 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 SRFBP1Q8NEF9 429 aaKnown RBP5.33□□□□□ -1.56
ATXN3-218ENST00000553309 PHOSPHO2Q8TCD6 241 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 MRPL38Q96DV4 380 aaKnown RBP5.33□□□□□ -1.56
ATXN3-218ENST00000553309 MCRS1Q96EZ8 462 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 PAIP2Q9BPZ3 127 aaKnown RBP5.33□□□□□ -1.56
ATXN3-218ENST00000553309 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 STK33Q9BYT3 514 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 SPATC1LQ9H0A9 340 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 MYH16Q9H6N6 1097 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 PAPOLBQ9NRJ5 636 aaKnown RBP5.33□□□□□ -1.56
ATXN3-218ENST00000553309 CNPY2Q9Y2B0 182 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 SQORQ9Y6N5 450 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 R4GN57 208 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 CACNA1IQ9P0X4 2223 aa5.33□□□□□ -1.56
ATXN3-218ENST00000553309 GRIN2DO15399 1336 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 F8W810 466 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 PCDH17O14917 1159 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 LINC01565O15544 149 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 STRNO43815 780 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 KAT7O95251 611 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 ASNSP08243 561 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 RFPL3SP0C7P2 107 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 SNHG28P0DPA3 235 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 SCP2P22307 547 aa5.32□□□□□ -1.56
ATXN3-218ENST00000553309 CST5P28325 142 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms