RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LINC00303Q3SY05 128 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 ATXN7L2Q5T6C5 722 aaPredicted RBP14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 ATG14Q6ZNE5 492 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 ZNF354CQ86Y25 554 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 ZSCAN1Q8NBB4 408 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 CASKIN2Q8WXE0 1202 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 EXTL1Q92935 676 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 TMEM159Q96B96 161 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 TRIM4Q9C037 500 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 LRRN3Q9H3W5 708 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 STARD5Q9NSY2 213 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 TMEM248Q9NWD8 314 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 DKK3Q9UBP4 350 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 PISDQ9UG56 409 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 RABGEF1Q9UJ41 708 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 TMEM59LQ9UK28 342 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 LOXL2Q9Y4K0 774 aa14.35□□□□□ -0.11
CHMP1A-210ENST00000551981 UNC13CQ8NB66 2214 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 BUB1O43683 1085 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 KDELR3O43731 214 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 NOBOXO60393 691 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 HGFP14210 728 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 ADRA1BP35368 520 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 RAPGEF1Q13905 1077 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 NFATC4Q14934 902 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 TGIF1Q15583 401 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 ALG11Q2TAA5 492 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 MANEAQ5SRI9 462 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 MANEALQ5VSG8 457 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 TAF3Q5VWG9 929 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 TRNP1Q6NT89 227 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 ENPP7Q6UWV6 458 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 LEKR1Q6ZMV7 388 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 RD3Q7Z3Z2 195 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 NLRP14Q86W24 1093 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 TSACCQ96A04 125 aaPredicted RBP14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 TBC1D31Q96DN5 1066 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 TTYH3Q9C0H2 523 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 KLQ9UEF7 1012 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 PCDHB11Q9Y5F2 797 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 LRRK1Q38SD2 2015 aa14.34□□□□□ -0.11
CHMP1A-210ENST00000551981 COL12A1Q99715 3063 aa14.33□□□□□ -0.11
CHMP1A-210ENST00000551981 A0A1W2PQM1 296 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM170AA1A519 330 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 TMCC1O94876 653 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 TIMP2P16035 220 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 SDC4P31431 198 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 SRP54P61011 504 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 RHOAP61586 193 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 TCEA2Q15560 299 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 MAN2A1Q16706 1144 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 CDO1Q16878 200 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 TMEM52BQ4KMG9 183 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 C2CD6Q53TS8 623 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 CCNJLQ8IV13 435 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 EMC1Q8N766 993 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 VOPP1Q96AW1 172 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 SEMA3CQ99985 751 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 NCAPGQ9BPX3 1015 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 METTL5Q9NRN9 209 aaKnown RBP14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 APPL1Q9UKG1 709 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 MFHAS1Q9Y4C4 1052 aa14.33□□□□□ -0.12
CHMP1A-210ENST00000551981 TERTO14746 1132 aaKnown RBP14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 LRIG2O94898 1065 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 TNFP01375 233 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM87AP0C7U9 286 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 INPP5AQ14642 412 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 WSCD2Q2TBF2 565 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 INO80DQ53TQ3 878 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 ERAP2Q6P179 960 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 IRF2BP1Q8IU81 584 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM114A1Q8IWE2 563 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 Q8N9G6 341 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 HCAR2Q8TDS4 363 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 CPA5Q8WXQ8 436 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 WDR92Q96MX6 357 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 CMKLR1Q99788 373 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 APOOQ9BUR5 198 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 PCDHGA4Q9Y5G9 962 aa14.32□□□□□ -0.12
CHMP1A-210ENST00000551981 PRAMEF33A0A0G2JMD5 474 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM72CH0Y354 149 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 PRAMEF10O60809 474 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 PPFIA2O75334 1257 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 PLEKP08567 350 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 PRKCSHP14314 528 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 PNLIPP16233 465 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 GLB1P16278 677 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 ITIH2P19823 946 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 CD82P27701 267 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 NOMO3P69849 1222 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 MTM1Q13496 603 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 GRM3Q14832 879 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 C15orf59Q2T9L4 293 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 CERCAMQ5T4B2 595 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 CFAP58Q5T655 872 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 FAM72AQ5TYM5 149 aa14.31□□□□□ -0.12
CHMP1A-210ENST00000551981 TMEM164Q5U3C3 297 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms