RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 CPA5Q8WXQ8 436 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ARHGEF2Q92974 986 aaKnown RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 HIC2Q96JB3 615 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 TBATAQ96M53 351 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 KLF6Q99612 283 aaPredicted RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 TM6SF2Q9BZW4 377 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 SEMA4CQ9C0C4 833 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ABCG4Q9H172 646 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 OSBPL2Q9H1P3 480 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 MAGEH1Q9H213 219 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ZDHHC6Q9H6R6 413 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ZFP64Q9NPA5 681 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 METTL5Q9NRN9 209 aaKnown RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 TMEM248Q9NWD8 314 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 OR12D3Q9UGF7 316 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 SALL4Q9UJQ4 1053 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 NOCTQ9UK39 431 aaKnown RBP7.74□□□□□ -1.17
NEK3-201ENST00000550331 HPCAL4Q9UM19 191 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 DAAM1Q9Y4D1 1078 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 PCDHB1Q9Y5F3 818 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 U3KQA8 63 aa7.74□□□□□ -1.17
NEK3-201ENST00000550331 ZSCAN5CA6NGD5 496 aaPredicted RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 C2CD4BA6NLJ0 364 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 PES1O00541 588 aaKnown RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 NEMP1O14524 444 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 TOR1BO14657 336 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 AREL1O15033 823 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 AQP9O43315 295 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 RAMP2O60895 175 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 USP12O75317 370 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CSO75390 466 aaKnown RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 LRIG2O94898 1065 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 POP4O95707 220 aaKnown RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 C6P13671 934 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 ABL2P42684 1182 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 UCNP55089 124 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 GSCP56915 257 aaPredicted RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 SNRPD1P62314 119 aaKnown RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 GABREP78334 506 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CDR2Q01850 454 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CBLBQ13191 982 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 PDE1CQ14123 709 aaPredicted RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 PTK2BQ14289 1009 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CDO1Q16878 200 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 ISXQ2M1V0 245 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CCDC14Q49A88 953 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 HSP90AA4PQ58FG1 418 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 ZNF542PQ5EBM4 170 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 RWDD4Q6NW29 188 aaKnown RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 TRIM72Q6ZMU5 477 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 STRADAQ7RTN6 431 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 RYBPQ8N488 228 aaPredicted RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 TPCN2Q8NHX9 752 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 IFI44Q8TCB0 444 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 BTN2A2Q8WVV5 523 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 RXFP2Q8WXD0 754 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CASKIN2Q8WXE0 1202 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CENPIQ92674 756 aaPredicted RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 NTAN1Q96AB6 310 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 VOPP1Q96AW1 172 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CENPTQ96BT3 561 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 TBC1D31Q96DN5 1066 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 POLR1BQ9H9Y6 1135 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 CPNE5Q9HCH3 593 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 NDFIP2Q9NV92 336 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 IPO11Q9UI26 975 aaKnown RBP7.73□□□□□ -1.17
NEK3-201ENST00000550331 KLF15Q9UIH9 416 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 NEU3Q9UQ49 428 aa7.73□□□□□ -1.17
NEK3-201ENST00000550331 EME2A4GXA9 379 aaPredicted RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 IGLON5A6NGN9 336 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 C16orf96A6NNT2 1141 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 FAM72CH0Y354 149 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 KRIT1O00522 736 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 KDELR3O43731 214 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 TCEA3O75764 348 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 NEBLO76041 1014 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 GFPT2O94808 682 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 MPOP05164 745 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 UGT2B4P06133 528 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 UNGP13051 313 aaPredicted RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 MYF5P13349 255 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 GKP32189 559 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 SOX5P35711 763 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 THOP1P52888 689 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 HDAC4P56524 1084 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 JAM2P57087 298 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 YPEL5P62699 121 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 FMO1Q01740 532 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 RAD51Q06609 339 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 EIF2B5Q13144 721 aaKnown RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 NR0B2Q15466 257 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 C15orf59Q2T9L4 293 aaPredicted RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 MYLK3Q32MK0 819 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 INO80DQ53TQ3 878 aaPredicted RBP7.72□□□□□ -1.17
NEK3-201ENST00000550331 TPRG1LQ5T0D9 272 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 FAM72AQ5TYM5 149 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 FAM72DQ6L9T8 149 aa7.72□□□□□ -1.17
NEK3-201ENST00000550331 GUSBP11Q6P575 273 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms