RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 EID2Q8N6I1 236 aa11.92□□□□□ -0.5
LETMD1-221ENST00000550100 CTNNBL1Q8WYA6 563 aaPredicted RBP11.92□□□□□ -0.5
LETMD1-221ENST00000550100 RAB7BQ96AH8 199 aa11.92□□□□□ -0.5
LETMD1-221ENST00000550100 LENG8Q96PV6 779 aaPredicted RBP11.92□□□□□ -0.5
LETMD1-221ENST00000550100 SMIM14Q96QK8 99 aa11.92□□□□□ -0.5
LETMD1-221ENST00000550100 SP110Q9HB58 689 aa11.92□□□□□ -0.5
LETMD1-221ENST00000550100 HS3ST3A1Q9Y663 406 aa11.92□□□□□ -0.5
LETMD1-221ENST00000550100 CACNA1BQ00975 2339 aa11.92□□□□□ -0.5
LETMD1-221ENST00000550100 A0A0U1RQS6 177 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 TRIM38O00635 465 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 MTA2O94776 668 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 MYF5P13349 255 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 IGFALSP35858 605 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 GRK6P43250 576 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 SCNN1BP51168 640 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 ZNF75DP51815 510 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 ZNF135P52742 658 aaPredicted RBP11.91□□□□□ -0.5
LETMD1-221ENST00000550100 CLDN6P56747 220 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 MAXP61244 160 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 GBE1Q04446 702 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 NSUN2Q08J23 767 aaKnown RBP eCLIP11.91□□□□□ -0.5
LETMD1-221ENST00000550100 DNAJC3Q13217 504 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 KRT81Q14533 505 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 UGP2Q16851 508 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 TMEM52BQ4KMG9 183 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 LZTR1Q8N653 840 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 TP53I13Q8NBR0 393 aaPredicted RBP11.91□□□□□ -0.5
LETMD1-221ENST00000550100 GATA6Q92908 595 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 FAF2Q96CS3 445 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 ECHDC3Q96DC8 303 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 CCDC42Q96M95 316 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 PSKH2Q96QS6 385 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 CINPQ9BW66 212 aaPredicted RBP11.91□□□□□ -0.5
LETMD1-221ENST00000550100 CALN1Q9BXU9 219 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 DEF6Q9H4E7 631 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 NOD2Q9HC29 1040 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 ZNHIT6Q9NWK9 470 aaKnown RBP11.91□□□□□ -0.5
LETMD1-221ENST00000550100 PCDHGC4Q9Y5F7 938 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 LAMA5O15230 3695 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 CFAP47Q6ZTR5 3102 aa11.91□□□□□ -0.5
LETMD1-221ENST00000550100 FAM221BA6H8Z2 402 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 RCCD1A6NED2 376 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 A8MX80 341 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 NEMP1O14524 444 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 RIOK3O14730 519 aaKnown RBP11.9□□□□□ -0.5
LETMD1-221ENST00000550100 DFNA5O60443 496 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 ITGAVP06756 1048 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 KDELR1P24390 212 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 PFN3P60673 137 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 RAD51Q06609 339 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 OVGP1Q12889 678 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 RALGDSQ12967 914 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 EIF2B5Q13144 721 aaKnown RBP11.9□□□□□ -0.5
LETMD1-221ENST00000550100 SGCGQ13326 291 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 RFTN1Q14699 578 aaPredicted RBP11.9□□□□□ -0.5
LETMD1-221ENST00000550100 SUZ12Q15022 739 aaKnown RBP11.9□□□□□ -0.5
LETMD1-221ENST00000550100 PAFAH1B3Q15102 231 aaKnown RBP11.9□□□□□ -0.5
LETMD1-221ENST00000550100 WSCD2Q2TBF2 565 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 SLC45A4Q5BKX6 768 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 TMCO4Q5TGY1 634 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 KCTD16Q68DU8 428 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 PTAR1Q7Z6K3 402 aaPredicted RBP11.9□□□□□ -0.5
LETMD1-221ENST00000550100 PELI3Q8N2H9 469 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 KCTD6Q8NC69 237 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 ASB12Q8WXK4 309 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 ADAMTS14Q8WXS8 1223 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 SKA1Q96BD8 255 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 ZNF641Q96N77 438 aaPredicted RBP11.9□□□□□ -0.5
LETMD1-221ENST00000550100 TCEAL2Q9H3H9 227 aaPredicted RBP11.9□□□□□ -0.5
LETMD1-221ENST00000550100 GOLPH3Q9H4A6 298 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 SALL4Q9UJQ4 1053 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 ASXL3Q9C0F0 2248 aa11.9□□□□□ -0.5
LETMD1-221ENST00000550100 DGKAP23743 735 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 MAN1A1P33908 653 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 MMP12P39900 470 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 LIG3P49916 1009 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 GALNT2Q10471 571 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 TRAF2Q12933 501 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 HNRNPDQ14103 355 aaKnown RBP11.89□□□□□ -0.51
LETMD1-221ENST00000550100 HADHQ16836 314 aaKnown RBP11.89□□□□□ -0.51
LETMD1-221ENST00000550100 CCDC157Q569K6 752 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 KYAT3Q6YP21 454 aaKnown RBP11.89□□□□□ -0.51
LETMD1-221ENST00000550100 B4GALNT4Q76KP1 1039 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 CNGA4Q8IV77 575 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 TEX26Q8N6G2 289 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 PLA2G15Q8NCC3 412 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 HCAR2Q8TDS4 363 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 ZNF599Q96NL3 588 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 TUBGCP5Q96RT8 1024 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 CDC6Q99741 560 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 MGME1Q9BQP7 344 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 RCOR3Q9P2K3 495 aaPredicted RBP11.89□□□□□ -0.51
LETMD1-221ENST00000550100 SEPT3Q9UH03 358 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 SPTY2D1-AS1A0A0U1RR47 76 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 A6NNZ2 444 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 HTRA2O43464 458 aaPredicted RBP11.89□□□□□ -0.51
LETMD1-221ENST00000550100 TNFSF14O43557 240 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 SIGLEC6O43699 453 aa11.89□□□□□ -0.51
LETMD1-221ENST00000550100 NEBLO76041 1014 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms