RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SLC8A1P32418 973 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 CD68P34810 354 aaPredicted RBP9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 NUDT1P36639 197 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 WNT3AP56704 352 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 SKOR1P84550 965 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 CDH17Q12864 832 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 FZD5Q13467 585 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 CUL1Q13616 776 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 DNAJC21Q5F1R6 531 aaKnown RBP9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 ARSIQ5FYB1 569 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 CWF19L1Q69YN2 538 aaKnown RBP9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 FBXL19Q6PCT2 694 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 TMPRSS6Q8IU80 811 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 SFTPA1Q8IWL2 248 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 IFT20Q8IY31 132 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 GRIN3AQ8TCU5 1115 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 UBXN4Q92575 508 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 ECHDC3Q96DC8 303 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 FAM129BQ96TA1 746 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 ACOX2Q99424 681 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 PRRX2Q99811 253 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 TBL1YQ9BQ87 522 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 C1QTNF1Q9BXJ1 281 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 TDRD1Q9BXT4 1180 aaKnown RBP9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 PCED1AQ9H1Q7 454 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 PABPC3Q9H361 631 aaKnown RBP9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 ETNK1Q9HBU6 452 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 SGK2Q9HBY8 427 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 ARNT2Q9HBZ2 717 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 ZDHHC4Q9NPG8 344 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 RAD18Q9NS91 495 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 SPATA6Q9NWH7 488 aaPredicted RBP9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 BCCIPQ9P287 314 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 MTRF1LQ9UGC7 380 aaKnown RBP9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 EBF1Q9UH73 591 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 FBXO4Q9UKT5 387 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 WASF2Q9Y6W5 498 aa9.85□□□□□ -0.83
SMARCD1-206ENST00000549274 PLXND1Q9Y4D7 1925 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 LOC285095A0A1B0GVY8 99 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 UPK3BL1B0FP48 263 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 UPK3BL2E5RIL1 263 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 H0Y858 1186 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PSMD11O00231 422 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 TRAFD1O14545 582 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 MUSKO15146 869 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 EIF3HO15372 352 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PPFIA2O75334 1257 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PMPCBO75439 489 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PGLSO95336 258 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 SLC34A2O95436 690 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 METTL18O95568 372 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 DCNP07585 359 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 MMP2P08253 660 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 WASP42768 502 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 RGRP47804 291 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PSMD8P48556 350 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 VPS41P49754 854 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 NUMBP49757 651 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 COPAP53621 1224 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 RPS14P62263 151 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 NIPAL4Q0D2K0 466 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 IZUMO3Q5VZ72 239 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 ZDHHC20Q5W0Z9 365 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 DUPD1Q68J44 220 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 NEK5Q6P3R8 708 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 KDELC1Q6UW63 502 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 KIAA1324Q6UXG2 1013 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 SLC36A4Q6YBV0 504 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 Q6ZS52 159 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 B4GALNT4Q76KP1 1039 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 ERN2Q76MJ5 926 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 NLRP9Q7RTR0 991 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PRPF39Q86UA1 669 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 CCNJLQ8IV13 435 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 MMAAQ8IVH4 418 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PDIK1LQ8N165 341 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PGBD3Q8N328 593 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 ZNF366Q8N895 744 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 DNAAF3Q8N9W5 541 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 CHST14Q8NCH0 376 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 IPMKQ8NFU5 416 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 GABPB2Q8TAK5 448 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 GANCQ8TET4 914 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PDCD6IPQ8WUM4 868 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PTCD2Q8WV60 388 aaKnown RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 RMDN1Q96DB5 314 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 LRRC39Q96DD0 335 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 KLHL32Q96NJ5 620 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 NAT9Q9BTE0 207 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 MLPHQ9BV36 600 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 C10orf88Q9H8K7 445 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.84□□□□□ -0.832e-6■■□□□ 11.7
SMARCD1-206ENST00000549274 ANAPC5Q9UJX4 755 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 HCN2Q9UL51 889 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PPIL1Q9Y3C6 166 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 MTF2Q9Y483 593 aaPredicted RBP9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 PCDHB9Q9Y5E1 797 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 ACTL7AQ9Y615 435 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 A0A0C4DFX4 3053 aa9.84□□□□□ -0.83
SMARCD1-206ENST00000549274 MAGEB16A2A368 324 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms