RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 VAV1P15498 845 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 LMO2P25791 158 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ITGB7P26010 798 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GRNP28799 593 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GEMP55040 296 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 BOP1Q14137 746 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 SLC5A9Q2M3M2 681 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 C6orf118Q5T5N4 469 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 PKN3Q6P5Z2 889 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 CERS6Q6ZMG9 384 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 EEPD1Q7L9B9 569 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 RBM12BQ8IXT5 1001 aaKnown RBP4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ACRBPQ8NEB7 543 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 DDHD1Q8NEL9 900 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 SLC35B4Q969S0 331 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 FKBP10Q96AY3 582 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ABHD8Q96I13 439 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 GAD1Q99259 594 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ORAI3Q9BRQ5 295 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 PACSIN1Q9BY11 444 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 WNT16Q9UBV4 365 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 ACSL6Q9UKU0 697 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 DUSP12Q9UNI6 340 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 HS3ST3A1Q9Y663 406 aa4.95□□□□□ -1.62
SCAF11-212ENST00000549162 H3BMM5 538 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 AREL1O15033 823 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 BEST1O76090 585 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 ADH1BP00325 375 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 MPOP05164 745 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 PTPN3P26045 913 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CORO1AP31146 461 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 STX2P32856 288 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 LTBRP36941 435 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 PPM1FP49593 454 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TMPRSS15P98073 1019 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 DEUP1Q05D60 604 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 BYSLQ13895 437 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 GALEQ14376 348 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 MYBPC3Q14896 1274 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 NAA25Q14CX7 972 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 ALFQ53S48 1182 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 GJC2Q5T442 439 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TMEM81Q6P7N7 255 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 RINLQ6ZS11 566 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CHSY3Q70JA7 882 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 AGGF1Q8N302 714 aaeCLIP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 BAHD1Q8TBE0 780 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF653Q96CK0 615 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 GRAMD1AQ96CP6 724 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SLC39A8Q9C0K1 460 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF446Q9NWS9 450 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 FBXO4Q9UKT5 387 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SMG5Q9UPR3 1016 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 FNDC3AQ9Y2H6 1198 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 FCF1Q9Y324 198 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 NR2E1Q9Y466 385 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 PCSK5Q92824 1860 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 GOLGA6L10A0A0M3HER8 536 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 RASA4BC9J798 803 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 MYO1FO00160 1098 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TGM5O43548 720 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 NPHS1O60500 1241 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TRPA1O75762 1119 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 NPPAP01160 153 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 IVLP07476 585 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 FDXRP22570 491 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CHKAP35790 457 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 KIR2DL1P43626 348 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SERPINH1P50454 418 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SOX10P56693 466 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 XIAPP98170 497 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 HYAL1Q12794 435 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SFSWAPQ12872 951 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SNX1Q13596 522 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SEPT7Q16181 437 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TPD52L1Q16890 204 aaPredicted RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 LONRF2Q1L5Z9 754 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 HECTD3Q5T447 861 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 GRTP1Q5TC63 336 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SEL1L2Q5TEA6 688 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 ESRP1Q6NXG1 681 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SYCE2Q6PIF2 218 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 BRAT1Q6PJG6 821 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TMEM270Q6UE05 265 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.94□□□□□ -1.626e-16■■■■■ 50.6
SCAF11-212ENST00000549162 ADIPOR2Q86V24 386 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 GPR78Q96P69 363 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TEX101Q9BY14 249 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 ZNF69Q9UC07 566 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CDH7Q9ULB5 785 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 YBX2Q9Y2T7 364 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CLDN5O00501 218 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SYF2O95926 243 aaKnown RBP4.94□□□□□ -1.62
SCAF11-212ENST00000549162 PRLP01236 227 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TACR2P21452 398 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 SDC4P31431 198 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 CRHR1P34998 444 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 TRIM23P36406 574 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 EPHB3P54753 998 aa4.94□□□□□ -1.62
SCAF11-212ENST00000549162 KRT17Q04695 432 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms