RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 TMED1Q13445 227 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 FASTKQ14296 549 aaKnown RBP13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 GK3PQ14409 553 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 ARL13BQ3SXY8 428 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 FBXO47Q5MNV8 452 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 CERCAMQ5T4B2 595 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 PRPF38BQ5VTL8 546 aaKnown RBP13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 C9orf57Q5W0N0 161 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 TMEM198Q66K66 360 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 PRMT9Q6P2P2 845 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 POTEHQ6S545 545 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 GK5Q6ZS86 529 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 GPR141Q7Z602 305 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 KLHDC8BQ8IXV7 354 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 SIX6OS1Q8N1H7 587 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 CCNYL1Q8N7R7 359 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 GOLM1Q8NBJ4 401 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 PPHLN1Q8NEY8 458 aaKnown RBP13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 SLC2A14Q8TDB8 520 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 KCTD13Q8WZ19 329 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 GLT1D1Q96MS3 346 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 MLPHQ9BV36 600 aaPredicted RBP13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 RHOBTB2Q9BYZ6 727 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 COQ10BQ9H8M1 238 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 GDAP2Q9NXN4 497 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 CACNA2D2Q9NY47 1150 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 RRN3Q9NYV6 651 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 CNOT6Q9ULM6 557 aaKnown RBP13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 PCDHGB4Q9UN71 923 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 PCDHGB5Q9Y5G0 923 aa13.55□□□□□ -0.24
SMPDL3B-206ENST00000549094 ZNF638Q14966 1978 aaKnown RBP13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 FAM95CA0A1B0GW59 222 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 RRN3P2A6NIE6 340 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 KCNU1A8MYU2 1149 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 H3BSA7 217 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 STX16-NPEPL1H3BU86 382 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 PHGDHO43175 533 aaKnown RBP13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 USP12O75317 370 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 VTNP04004 478 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 ABCG1P45844 678 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 TKTL1P51854 596 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 EMP3P54852 163 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 SLC12A2P55011 1212 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 ZBTB17Q13105 803 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 ZBTB6Q15916 424 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 SV2CQ496J9 727 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 PCID2Q5JVF3 399 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 ACBD5Q5T8D3 534 aaPredicted RBP13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 RWDD4Q6NW29 188 aaKnown RBP13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 SLC27A1Q6PCB7 646 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 SLC41A1Q8IVJ1 513 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 CENPLQ8N0S6 344 aaPredicted RBP13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 TMEM151AQ8N4L1 468 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 RNF148Q8N7C7 305 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 FNDC8Q8TC99 324 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 ROPN1LQ96C74 230 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 MARK4Q96L34 752 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 TCF12Q99081 682 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 HTATIP2Q9BUP3 242 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 CAAP1Q9H8G2 361 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 MEAF6Q9HAF1 191 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 CROTQ9UKG9 612 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 AAR2Q9Y312 384 aaKnown RBP13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 NRCAMQ92823 1304 aa13.54□□□□□ -0.24
SMPDL3B-206ENST00000549094 TRIM64CA6NLI5 447 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 PSMD12O00232 456 aaPredicted RBP13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 MRASO14807 208 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 PPEF2O14830 753 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 UBDO15205 165 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 HTRA2O43464 458 aaPredicted RBP13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 C7P10643 843 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 NMBRP28336 390 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 ADRA1BP35368 520 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 GLRBP48167 497 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 STX1BP61266 288 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 GALNT1Q10472 559 aaPredicted RBP13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 ILF2Q12905 390 aaKnown RBP13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 SEMA3BQ13214 749 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 LRP8Q14114 963 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 PCBP1Q15365 356 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 GRIK4Q16099 956 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 NRF1Q16656 503 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 INTS11Q5TA45 600 aaKnown RBP13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 PKN3Q6P5Z2 889 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 PIGZQ86VD9 579 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 FIBCD1Q8N539 461 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 MFSD2AQ8NA29 543 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 LRTOMTQ8WZ04 291 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 LPGAT1Q92604 370 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 TSGA13Q96PP4 275 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 PPP1R16BQ96T49 567 aa13.53□□□□□ -0.24
SMPDL3B-206ENST00000549094 HNRNPABQ99729 332 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms