RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 CERCAMQ5T4B2 595 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 FHL5Q5TD97 284 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 OGFOD3Q6PK18 319 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 TMPRSS9Q7Z410 1059 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 SPRED1Q7Z699 444 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 SETD3Q86TU7 594 aaPredicted RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 HID1Q8IV36 788 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 PCDH20Q8N6Y1 951 aaKnown RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 RNF214Q8ND24 703 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 TAAR9Q96RI9 348 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 TUBGCP2Q9BSJ2 902 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 SLC4A5Q9BY07 1137 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 CEP44Q9C0F1 390 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 VPS16Q9H269 839 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 MBNL1Q9NR56 388 aaKnown RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 DDIT4Q9NX09 232 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 LIMA1Q9UHB6 759 aaKnown RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 GGT7Q9UJ14 662 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 ITM2BQ9Y287 266 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 POLQO75417 2590 aa9.37□□□□□ -0.91
SSH1-205ENST00000546812 ZFC3H1O60293 1989 aaKnown RBP9.37□□□□□ -0.91
SSH1-205ENST00000546812 NYNRINQ9P2P1 1898 aaKnown RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 CACNA1DQ01668 2161 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 SYNJ2BP-COX16A0A087WUM0 186 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 PRR19A6NJB7 356 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 C16orf96A6NNT2 1141 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 HGSO14964 777 aaPredicted RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 AREL1O15033 823 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 NKX2-8O15522 239 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 PAGE1O75459 146 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 KRT38O76015 456 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 TPM2P07951 284 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 KRT7P08729 469 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 FGF3P11487 239 aaPredicted RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 CDK11BP21127 795 aaKnown RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 GGCXP38435 758 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 COPB1P53618 953 aaKnown RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 MLLT10P55197 1068 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 RIPPLY3P57055 190 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 TPM4P67936 248 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 SLC20A2Q08357 652 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 ARHGEF7Q14155 803 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 TAF5Q15542 800 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 TCEA2Q15560 299 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 VWA3BQ502W6 1294 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 ALFQ53S48 1182 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 EFHC2Q5JST6 749 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 RETSATQ6NUM9 610 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 TMEM110Q86TL2 294 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 PIM3Q86V86 326 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 ANKRD20A12PQ8NF67 263 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 SSC4DQ8WTU2 575 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 APOBEC4Q8WW27 367 aaKnown RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 TSACCQ96A04 125 aaPredicted RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 ARHGEF26Q96DR7 871 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 SLC45A3Q96JT2 553 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 CRACR2AQ9BSW2 395 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 C1QTNF7Q9BXJ2 289 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 INTS2Q9H0H0 1204 aaKnown RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 NDST4Q9H3R1 872 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 COX16Q9P0S2 106 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 LRIT1Q9P2V4 623 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 HECAQ9UBI9 543 aaPredicted RBP9.36□□□□□ -0.91
SSH1-205ENST00000546812 UNC13CQ8NB66 2214 aa9.36□□□□□ -0.91
SSH1-205ENST00000546812 CSMD1Q96PZ7 3565 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 LGALS16A8MUM7 142 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 E5RJQ4 531 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 NUDT21O43809 227 aaKnown RBP9.35□□□□□ -0.91
SSH1-205ENST00000546812 MMP20O60882 483 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 VPS4BO75351 444 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 ZMPSTE24O75844 475 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 TM7SF2O76062 418 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 ADCY5O95622 1261 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 CPNE6O95741 557 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 GLI1P08151 1106 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 HTR1BP28222 390 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 UQCRFS1P47985 274 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 SERPINH1P50454 418 aaKnown RBP9.35□□□□□ -0.91
SSH1-205ENST00000546812 SRP54P61011 504 aaKnown RBP9.35□□□□□ -0.91
SSH1-205ENST00000546812 B4GALNT1Q00973 533 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 APBA1Q02410 837 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 CETN1Q12798 172 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 HLTFQ14527 1009 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSH1-205ENST00000546812 MAP9Q49MG5 647 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 ZNF805Q5CZA5 627 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 DENND1BQ6P3S1 775 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 APTXQ7Z2E3 356 aaKnown RBP9.35□□□□□ -0.91
SSH1-205ENST00000546812 RD3Q7Z3Z2 195 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 PLPP6Q8IY26 295 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 CACNA2D3Q8IZS8 1091 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 DEFB106AQ8N104 65 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 TP53I13Q8NBR0 393 aaPredicted RBP9.35□□□□□ -0.91
SSH1-205ENST00000546812 KAT5Q92993 513 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 PMEPA1Q969W9 287 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 SLC2A13Q96QE2 648 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 RBM15Q96T37 977 aaKnown RBP eCLIP9.35□□□□□ -0.91
SSH1-205ENST00000546812 SPON2Q9BUD6 331 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 SIK2Q9H0K1 926 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 ZDHHC6Q9H6R6 413 aa9.35□□□□□ -0.91
SSH1-205ENST00000546812 VPS4AQ9UN37 437 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms