RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 HSPA9P38646 679 aaKnown RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 EIF4A3P38919 411 aaKnown RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 RPIAP49247 311 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 PEX5P50542 639 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 UBASH3AP57075 661 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 AP1S1P61966 158 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 POLR2LP62875 67 aaKnown RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 ZBED6P86452 979 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 INSM1Q01101 510 aaPredicted RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 PPARDQ03181 441 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 BCL2L1Q07817 233 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 IL10RBQ08334 325 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 NSUN2Q08J23 767 aaKnown RBP eCLIP9.45□□□□□ -0.9
YBX3-218ENST00000546298 RTP5Q14D33 572 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 LRRC14Q15048 493 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 LRRC73Q5JTD7 316 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 FAXCQ5TGI0 409 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 AFMIDQ63HM1 303 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 E4F1Q66K89 784 aaPredicted RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 BBS5Q8N3I7 341 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 DCBLD1Q8N8Z6 715 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 NETO2Q8NC67 525 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 ZNF548Q8NEK5 533 aaPredicted RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 LMX1AQ8TE12 382 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 SCG3Q8WXD2 468 aaKnown RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 VOPP1Q96AW1 172 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 EXOC2Q96KP1 924 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 ZNF599Q96NL3 588 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 PEBP4Q96S96 227 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 FUCA2Q9BTY2 467 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 WRAP53Q9BUR4 548 aaKnown RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 CBX8Q9HC52 389 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 PCDH12Q9NPG4 1184 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 CWC15Q9P013 229 aaKnown RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 SEPT3Q9UH03 358 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 IP6K2Q9UHH9 426 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 ATP8A1Q9Y2Q0 1164 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 LUC7L2Q9Y383 392 aaKnown RBP9.45□□□□□ -0.9
YBX3-218ENST00000546298 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
YBX3-218ENST00000546298 IGF2RP11717 2491 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 DNAH14Q0VDD8 3507 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.44□□□□□ -0.9
YBX3-218ENST00000546298 RRP8O43159 456 aaKnown RBP9.44□□□□□ -0.9
YBX3-218ENST00000546298 NEBLO76041 1014 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 PIGNO95427 931 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 ACTN2P35609 894 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 IGFALSP35858 605 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 CLDN6P56747 220 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 EIF2B5Q13144 721 aaKnown RBP9.44□□□□□ -0.9
YBX3-218ENST00000546298 DPYSQ14117 519 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 AGERQ15109 404 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 DPYSL2Q16555 572 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 C19orf48Q6RUI8 117 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 TMCO3Q6UWJ1 677 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 MACC1Q6ZN28 852 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 LRRC69Q6ZNQ3 347 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 LUZP1Q86V48 1076 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 CAMK1DQ8IU85 385 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 PHACTR4Q8IZ21 702 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 LSMEM2Q8N112 164 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 SDR16C5Q8N3Y7 309 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 FSTL5Q8N475 847 aaPredicted RBP9.44□□□□□ -0.9
YBX3-218ENST00000546298 TP53I13Q8NBR0 393 aaPredicted RBP9.44□□□□□ -0.9
YBX3-218ENST00000546298 TSEN2Q8NCE0 465 aaKnown RBP9.44□□□□□ -0.9
YBX3-218ENST00000546298 MAPK15Q8TD08 544 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 NSMCE1Q8WV22 266 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 HNRNPLLQ8WVV9 542 aaKnown RBP9.44□□□□□ -0.9
YBX3-218ENST00000546298 GRAMD1AQ96CP6 724 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 DEPDC7Q96QD5 511 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 PSKH2Q96QS6 385 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 TRIM7Q9C029 511 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 APOBEC3BQ9UH17 382 aaKnown RBP9.44□□□□□ -0.9
YBX3-218ENST00000546298 CAPN11Q9UMQ6 739 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 DOLKQ9UPQ8 538 aa9.44□□□□□ -0.9
YBX3-218ENST00000546298 USP24Q9UPU5 2620 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 A0A087WV48 116 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 CPED1A4D0V7 1026 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 LMO7DNF2Z398 122 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 MYO1FO00160 1098 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 PDE2AO00408 941 aaPredicted RBP9.43□□□□□ -0.9
YBX3-218ENST00000546298 BUB1BO60566 1050 aaPredicted RBP9.43□□□□□ -0.9
YBX3-218ENST00000546298 RASGRP1O95267 797 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ALPIP09923 528 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 C6P13671 934 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 CTSEP14091 401 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ITIH2P19823 946 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 KELP23276 732 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 SERPINB6P35237 376 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ABCG1P45844 678 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 LIG3P49916 1009 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 SCNN1BP51168 640 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ADKP55263 362 aaKnown RBP9.43□□□□□ -0.9
YBX3-218ENST00000546298 SEMG2Q02383 582 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ZNF235Q14590 738 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 LBRQ14739 615 aaKnown RBP9.43□□□□□ -0.9
YBX3-218ENST00000546298 NFATC4Q14934 902 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 IRF4Q15306 451 aa9.43□□□□□ -0.9
YBX3-218ENST00000546298 ELOCQ15369 112 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms