RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TMEM114B3SHH9 223 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 OR10H2O60403 315 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SH3BGRLO75368 114 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 ATP5HO75947 161 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PGM3O95394 542 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PIGRP01833 764 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 KCNA5P22460 613 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 GDI1P31150 447 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PSMD8P48556 350 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 RPS7P62081 194 aaKnown RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 IRF5Q13568 498 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 NR6A1Q15406 480 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 CRY1Q16526 586 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PAGE2BQ5JRK9 111 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 MARCH8Q5T0T0 291 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 LAYNQ6UX15 382 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 IZUMO2Q6UXV1 221 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 LUZP2Q86TE4 346 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SERINC5Q86VE9 423 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 LRRC52Q8N7C0 313 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 SNX27Q96L92 541 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 FBXL18Q96ME1 805 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PCDHB18PQ96TA0 734 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 TRMT61BQ9BVS5 477 aaKnown RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 RMND5AQ9H871 391 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 KRCC1Q9NPI7 259 aaPredicted RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 CNGB3Q9NQW8 809 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 IMP3Q9NV31 184 aaKnown RBP8.67□□□□□ -1.02
CLIP1-218ENST00000545889 ARL15Q9NXU5 204 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 TMCC3Q9ULS5 477 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 CDYLQ9Y232 598 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 RAD54BQ9Y620 910 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 PAPPA2Q9BXP8 1791 aa8.67□□□□□ -1.02
CLIP1-218ENST00000545889 TRBV23OR9-2A0A075B6M9 112 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 C1orf232A0A0U1RR37 186 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 QSOX1O00391 747 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ABLIM1O14639 778 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 GRM6O15303 877 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 PJA2O43164 708 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 PRKCIP41743 596 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 RABGGTBP53611 331 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ITGA8P53708 1063 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 DCTN2Q13561 401 aaKnown RBP8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ACAP1Q15027 740 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 PLEKHM3Q6ZWE6 761 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 HORMAD1Q86X24 394 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 STK40Q8N2I9 435 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
CLIP1-218ENST00000545889 HMGB4Q8WW32 186 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 EXOC2Q96KP1 924 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 DHRS1Q96LJ7 313 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 QRFPRQ96P65 431 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 PHF12Q96QT6 1004 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ZDHHC4Q9NPG8 344 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 PCDH10Q9P2E7 1040 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ASF1AQ9Y294 204 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 REXO2Q9Y3B8 237 aaKnown RBP8.66□□□□□ -1.02
CLIP1-218ENST00000545889 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-218ENST00000545889 H3BMM5 538 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 TPBGLP0DKB5 382 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 VAV1P15498 845 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 RPL17P18621 184 aaKnown RBP8.66□□□□□ -1.02
CLIP1-218ENST00000545889 HNF4AP41235 474 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 SERPINB8P50452 374 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 C1QTNF8P60827 252 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 BIKQ13323 160 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 CCINQ13939 588 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 SPIDRQ14159 915 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ZNHIT3Q15649 155 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-218ENST00000545889 GSTA3Q16772 222 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 CYP51A1Q16850 503 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 HGSNATQ68CP4 663 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 STRA8Q7Z7C7 330 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 METTL21AQ8WXB1 218 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 RUBCNQ92622 972 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 REPS1Q96D71 796 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 VAT1Q99536 393 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 SHCBP1LQ9BZQ2 653 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 TTYH3Q9C0H2 523 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 PCDH18Q9HCL0 1135 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 EVPLQ92817 2033 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 A0A0A6YYK5 440 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-218ENST00000545889 TRIM64CA6NLI5 447 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 H3BM21 787 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 CHRNA1P02708 482 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ITGA2BP08514 1039 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 SLC2A4P14672 509 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 UQCRBP14927 111 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 IRF8Q02556 426 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 LPIN1Q14693 890 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 CYTH1Q15438 398 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 CNGA2Q16280 664 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 PPP1R26Q5T8A7 1209 aaPredicted RBP8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ZNF544Q6NX49 715 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 KCNT2Q6UVM3 1135 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 CLEC4FQ8N1N0 589 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 INPP5DQ92835 1189 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 BCO2Q9BYV7 579 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 ADAMTS10Q9H324 1103 aa8.66□□□□□ -1.02
CLIP1-218ENST00000545889 DNPEPQ9ULA0 475 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms