RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 JUPP14923 745 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 CKMT2P17540 419 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 HNRNPH3P31942 346 aaKnown RBP13.28□□□□□ -0.28
CIT-214ENST00000544588 SERPINB6P35237 376 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 SUOXP51687 545 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 HNRNPKP61978 463 aaKnown RBP eCLIP13.28□□□□□ -0.28
CIT-214ENST00000544588 SLC25A11Q02978 314 aaKnown RBP13.28□□□□□ -0.28
CIT-214ENST00000544588 SLC10A7Q0GE19 358 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 PTK2BQ14289 1009 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 FZD2Q14332 565 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 ATP13A4Q4VNC1 1196 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 TMCO4Q5TGY1 634 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 BRAT1Q6PJG6 821 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 TMPRSS7Q7RTY8 843 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 SLC25A45Q8N413 288 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 ATPAF2Q8N5M1 289 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 DENND6BQ8NEG7 585 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 HCAR2Q8TDS4 363 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 ASB12Q8WXK4 309 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 VOPP1Q96AW1 172 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 MBNL1Q9NR56 388 aaKnown RBP13.28□□□□□ -0.28
CIT-214ENST00000544588 UVRAGQ9P2Y5 699 aa13.28□□□□□ -0.28
CIT-214ENST00000544588 ADAMTS9Q9P2N4 1935 aa13.27□□□□□ -0.28
CIT-214ENST00000544588 SSU72P8A0A1W2PR75 194 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 FAM221BA6H8Z2 402 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 TMEM8BA6NDV4 472 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 RIOK3O14730 519 aaKnown RBP13.27□□□□□ -0.29
CIT-214ENST00000544588 MUSKO15146 869 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 PIAS2O75928 621 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 NEBLO76041 1014 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 PROSCO94903 275 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 JUNDP17535 347 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 CSNK1DP48730 415 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 LIG3P49916 1009 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 CLDN6P56747 220 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 ITKQ08881 620 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 NSUN2Q08J23 767 aaKnown RBP eCLIP13.27□□□□□ -0.29
CIT-214ENST00000544588 ZNF211Q13398 564 aaPredicted RBP13.27□□□□□ -0.29
CIT-214ENST00000544588 MESDQ14696 234 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 TMEM52BQ4KMG9 183 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 PARGQ86W56 976 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 CPNE8Q86YQ8 564 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 MAP7D3Q8IWC1 876 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 KDF1Q8NAX2 398 aaPredicted RBP13.27□□□□□ -0.29
CIT-214ENST00000544588 LMX1AQ8TE12 382 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 CENPTQ96BT3 561 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 ZNF599Q96NL3 588 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 DNAJC7Q99615 494 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 CHP1Q99653 195 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 TMEM121BQ9BXQ6 578 aaPredicted RBP13.27□□□□□ -0.29
CIT-214ENST00000544588 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 NHEJ1Q9H9Q4 299 aaPredicted RBP13.27□□□□□ -0.29
CIT-214ENST00000544588 SCUBE2Q9NQ36 999 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 ABHD10Q9NUJ1 306 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 SPTLC3Q9NUV7 552 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 ATP8A1Q9Y2Q0 1164 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 PCDHGA1Q9Y5H4 931 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 PCNX2A6NKB5 2137 aa13.27□□□□□ -0.29
CIT-214ENST00000544588 CHD6Q8TD26 2715 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 SPTY2D1-AS1A0A0U1RR47 76 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 AKR1B15C9JRZ8 316 aaPredicted RBP13.26□□□□□ -0.29
CIT-214ENST00000544588 MAP3K6O95382 1288 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 CSF2P04141 144 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 PCCBP05166 539 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 CD48P09326 243 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 C1SP09871 688 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 C6P13671 934 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 IGFALSP35858 605 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 ACADVLP49748 655 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 TAS2R40P59535 323 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 PFN3P60673 137 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 MAXP61244 160 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 AP1S1P61966 158 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 POLR2LP62875 67 aaKnown RBP13.26□□□□□ -0.29
CIT-214ENST00000544588 C1orf61Q13536 156 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 LRRC14Q15048 493 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 FAXCQ5TGI0 409 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 MARC1Q5VT66 337 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 KANSL1Q7Z3B3 1105 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 ZSWIM9Q86XI8 627 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.26□□□□□ -0.29
CIT-214ENST00000544588 IFT43Q96FT9 208 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 PSKH2Q96QS6 385 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 CCDC86Q9H6F5 360 aaKnown RBP13.26□□□□□ -0.29
CIT-214ENST00000544588 PCDHGC4Q9Y5F7 938 aa13.26□□□□□ -0.29
CIT-214ENST00000544588 BAHCC1Q9P281 2608 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.25□□□□□ -0.29
CIT-214ENST00000544588 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TRABD2BA6NFA1 517 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 SCAMP1O15126 338 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 MAFKO60675 156 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 MFAP3LO75121 409 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 DKK1O94907 266 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 KRT7P08729 469 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TMEM253P0C7T8 217 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 CDK4P11802 303 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 MYF5P13349 255 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 TNNT1P13805 278 aa13.25□□□□□ -0.29
CIT-214ENST00000544588 NME1P15531 152 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms