RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 IRX4P78413 519 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 APBA1Q02410 837 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 SMARCB1Q12824 385 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 HNRNPDQ14103 355 aaKnown RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 TOB2Q14106 344 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 TIGD6Q17RP2 521 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 TCEAL6Q6IPX3 200 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 JMJD6Q6NYC1 403 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 LARP4Q71RC2 724 aaKnown RBP eCLIP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 ATG4DQ86TL0 474 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 ZSWIM9Q86XI8 627 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 CMTM8Q8IZV2 173 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 SLC15A4Q8N697 577 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 NLGN4YQ8NFZ3 816 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 IPO4Q8TEX9 1081 aaKnown RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 MZB1Q8WU39 189 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 ZCCHC14Q8WYQ9 949 aaKnown RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 TCEAL3Q969E4 200 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 ZMAT2Q96NC0 199 aaKnown RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 TSPAN18Q96SJ8 248 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 P2RY13Q9BPV8 354 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 NUSAP1Q9BXS6 441 aaKnown RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 SLC46A2Q9BY10 475 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 PLEKHA5Q9HAU0 1116 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 NECTIN3Q9NQS3 549 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 RLIMQ9NVW2 624 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 FBXO2Q9UK22 296 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-222ENST00000544585 CRYL1Q9Y2S2 319 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 PLEKHM1Q9Y4G2 1056 aa6.45□□□□□ -1.38
CPSF7-222ENST00000544585 LNP1A1A4G5 178 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 CCDC169A6NNP5 214 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 NEMFO60524 1076 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 UNC5CO95185 931 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 TOP3BO95985 862 aaKnown RBP6.44□□□□□ -1.38
CPSF7-222ENST00000544585 EGFP01133 1207 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 TYMPP19971 482 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 DDX6P26196 483 aaKnown RBP eCLIP6.44□□□□□ -1.38
CPSF7-222ENST00000544585 IL1R2P27930 398 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 KRT2P35908 639 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 AVPR1AP37288 418 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 CASRP41180 1078 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 RRADP55042 308 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 BPIFB4P59827 614 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 BYSLQ13895 437 aaKnown RBP6.44□□□□□ -1.38
CPSF7-222ENST00000544585 DMC1Q14565 340 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 VEPH1Q14D04 833 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 PDGFRLQ15198 375 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 SPDYCQ5MJ68 293 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 STXBP5Q5T5C0 1151 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 PMS2CLQ68D20 193 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 BORAQ6PGQ7 559 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 MPZL3Q6UWV2 235 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 DSTYKQ6XUX3 929 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 PDSS2Q86YH6 399 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 REXO1L1PQ8IX06 675 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 GLIS1Q8NBF1 620 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 ATAD1Q8NBU5 361 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 NUDT10Q8NFP7 164 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 OR56A3Q8NH54 315 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 C2orf15Q8WU43 125 aaKnown RBP6.44□□□□□ -1.38
CPSF7-222ENST00000544585 NUDT11Q96G61 164 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 GCNAQ96QF7 691 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 MYOCQ99972 504 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 NTPCRQ9BSD7 190 aaKnown RBP6.44□□□□□ -1.38
CPSF7-222ENST00000544585 TM6SF1Q9BZW5 370 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 OR10A2Q9H208 303 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 CDT1Q9H211 546 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 EBF3Q9H4W6 596 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 KIF9Q9HAQ2 790 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 C17orf75Q9HAS0 396 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 VWA8A3KMH1 1905 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 NCANO14594 1321 aa6.44□□□□□ -1.38
CPSF7-222ENST00000544585 TCRBV7S2A1N4TA0A589 114 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 MTMR11A4FU01 709 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 PRSS29PA6NIE9 313 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 EIF4E1BA6NMX2 242 aaKnown RBP6.43□□□□□ -1.38
CPSF7-222ENST00000544585 TMEM233B4DJY2 109 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 PIP5K1BO14986 540 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 DCLK1O15075 740 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 HYAL3O43820 417 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-222ENST00000544585 SLC43A1O75387 559 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 MED24O75448 989 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 REC8O95072 547 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 EDN1P05305 212 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 GRPP07492 148 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 PROZP22891 400 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 LRPAP1P30533 357 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 SLC11A2P49281 568 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 DHPSP49366 369 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-222ENST00000544585 PSMC1P62191 440 aaKnown RBP6.43□□□□□ -1.38
CPSF7-222ENST00000544585 SIM1P81133 766 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-222ENST00000544585 ATP2C1P98194 919 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-222ENST00000544585 BFSP1Q12934 665 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 ZNF268Q14587 947 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-222ENST00000544585 ZBTB6Q15916 424 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 KYAT1Q16773 422 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 ZNF568Q3ZCX4 644 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 GAGE13Q4V321 117 aa6.43□□□□□ -1.38
CPSF7-222ENST00000544585 SOWAHCQ53LP3 525 aaPredicted RBP6.43□□□□□ -1.38
CPSF7-222ENST00000544585 EARS2Q5JPH6 523 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms