RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 LSM12Q3MHD2 195 aaKnown RBP19.49■□□□□ 0.71
SUDS3-204ENST00000543473 PAGE2BQ5JRK9 111 aa19.49■□□□□ 0.71
SUDS3-204ENST00000543473 SCIMPQ6UWF3 145 aa19.49■□□□□ 0.71
SUDS3-204ENST00000543473 FAM156AQ8NDB6 213 aa19.49■□□□□ 0.71
SUDS3-204ENST00000543473 LPCAT1Q8NF37 534 aa19.49■□□□□ 0.71
SUDS3-204ENST00000543473 HDHD2Q9H0R4 259 aa19.49■□□□□ 0.71
SUDS3-204ENST00000543473 PREBQ9HCU5 417 aa19.49■□□□□ 0.71
SUDS3-204ENST00000543473 C8orf4Q9NR00 106 aa19.49■□□□□ 0.71
SUDS3-204ENST00000543473 PCDHB12Q9Y5F1 795 aa19.49■□□□□ 0.71
SUDS3-204ENST00000543473 SLC12A8A0AV02 714 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 FAM149AA5PLN7 773 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 SNPHO15079 494 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 H6PDO95479 791 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 USP17L7P0C7H9 530 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ALDH6A1Q02252 535 aaKnown RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 TSNQ15631 228 aaKnown RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 LDLRAP1Q5SW96 308 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ENDOVQ8N8Q3 282 aaKnown RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 SMAD5Q99717 465 aaKnown RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 GATA5Q9BWX5 397 aaPredicted RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 UNC93B1Q9H1C4 597 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 CDT1Q9H211 546 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ST6GALNAC4Q9H4F1 302 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 SH3BP4Q9P0V3 963 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ENOPH1Q9UHY7 261 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 TDRKHQ9Y2W6 561 aaKnown RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 RBMX2Q9Y388 322 aaKnown RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 CENPXA8MT69 81 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 PRRG1O14668 218 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 GSTM1P09488 218 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ZNF37AP17032 561 aaPredicted RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ZNF621Q6ZSS3 439 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 CYP4Z1Q86W10 505 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ARRDC4Q8NCT1 418 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 TRMOQ9BU70 441 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 SDCBP2Q9H190 292 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 TNFSF13BQ9Y275 285 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 TRIM43BA6NCK2 446 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 BBIP1A8MTZ0 92 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 FAM187BQ17R55 369 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 TREML2Q5T2D2 321 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 CERCAMQ5T4B2 595 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 PIGZQ86VD9 579 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 XYLT1Q86Y38 959 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 RAB42Q8N4Z0 105 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 KBTBD8Q8NFY9 601 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 OR52K2Q8NGK3 314 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 PPP1R14BQ96C90 147 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 RNFT2Q96EX2 444 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 TINF2Q9BSI4 451 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 COQ6Q9Y2Z9 468 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 SNX8Q9Y5X2 465 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 CCDC189A1A4V9 331 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 FAM220BPB1ANY3 271 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 LINGO3P0C6S8 592 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 IDO1P14902 403 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ZNF12P17014 697 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ADSLP30566 484 aaPredicted RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 MFSD10Q14728 455 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 CELF3Q5SZQ8 465 aaKnown RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ZNF57Q68EA5 555 aaPredicted RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 IQSEC1Q6DN90 963 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 ANKRD52Q8NB46 1076 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 FAM45AQ8TCE6 357 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 SOCS4Q8WXH5 440 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 PROX1Q92786 737 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 PDGFDQ9GZP0 370 aaPredicted RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 SENP6Q9GZR1 1112 aaPredicted RBP19.48■□□□□ 0.71
SUDS3-204ENST00000543473 PNPLA8Q9NP80 782 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 STARD7Q9NQZ5 370 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 MYPNQ86TC9 1320 aa19.48■□□□□ 0.71
SUDS3-204ENST00000543473 KPNA6O60684 536 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 EIF2S1P05198 315 aaKnown RBP19.47■□□□□ 0.71
SUDS3-204ENST00000543473 IL2P60568 153 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 FSCN1Q16658 493 aaKnown RBP19.47■□□□□ 0.71
SUDS3-204ENST00000543473 GCNT7Q6ZNI0 430 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 SLC4A11Q8NBS3 891 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 BHMTQ93088 406 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 COQ10BQ9H8M1 238 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 DNAAF2Q9NVR5 837 aaKnown RBP19.47■□□□□ 0.71
SUDS3-204ENST00000543473 SMPD3Q9NY59 655 aaPredicted RBP19.47■□□□□ 0.71
SUDS3-204ENST00000543473 SPATA2Q9UM82 520 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 TIGD2Q4W5G0 525 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 AKAP14Q86UN6 197 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 TTC30BQ8N4P2 665 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 SYT17Q9BSW7 474 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 CST3P01034 146 aaPredicted RBP19.47■□□□□ 0.71
SUDS3-204ENST00000543473 HPCAP84074 193 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 CASP12Q6UXS9 341 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 PAGE2Q7Z2X7 111 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 CDH24Q86UP0 819 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 MCFD2Q8NI22 146 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 DGKBQ9Y6T7 804 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 TOPAZ1Q8N9V7 1692 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 LINC00032P0C843 101 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 ATN1P54259 1190 aaPredicted RBP19.47■□□□□ 0.71
SUDS3-204ENST00000543473 SPIRE1Q08AE8 756 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 DLG1Q12959 904 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 RFX4Q33E94 735 aa19.47■□□□□ 0.71
SUDS3-204ENST00000543473 TRMT10BQ6PF06 316 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms