RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PA2G4Q9UQ80 394 aaKnown RBP4.08□□□□□ -1.76
SFSWAP-211ENST00000542813 REREQ9P2R6 1566 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF518AQ6AHZ1 1483 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SHANK2Q9UPX8 1470 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ADGRA2Q96PE1 1338 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 A6NL46 340 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 AHRRA9YTQ3 701 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 MCIDASD6RGH6 385 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 QSOX1O00391 747 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ADAMDEC1O15204 470 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 IPO8O15397 1037 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 CYP27B1O15528 508 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 USP12O75317 370 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SLC25A12O75746 678 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 CDKL5O76039 1030 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 NXPH3O95157 252 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SERPINC1P01008 464 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 FSHBP01225 129 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 HEXAP06865 529 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 TMEM11P17152 192 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 PON1P27169 355 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ITPKBP27987 946 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 CDAP32320 146 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 TCF7P36402 384 aaPredicted RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 POLGP54098 1239 aaPredicted RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 PNLIPRP2P54317 469 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 GALCP54803 685 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 YWHAZP63104 245 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 PSG6Q00889 435 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 LMAN2Q12907 356 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 RESTQ13127 1097 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 OLIG2Q13516 323 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 FGFBP1Q14512 234 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SEMA3AQ14563 771 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 PPP2R5BQ15173 497 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SF3B3Q15393 1217 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 CNGA3Q16281 694 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 RPE65Q16518 533 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 COLEC12Q5KU26 742 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SPDYAQ5MJ70 313 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 CST9LP1Q5W188 147 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 TCTN3Q6NUS6 607 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ARMC6Q6NXE6 501 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ALKBH5Q6P6C2 394 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SUSD1Q6UWL2 747 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 Q6ZWC4 215 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 PRSS45Q7RTY3 260 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 POLNQ7Z5Q5 900 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM185AQ8N0U4 392 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 RP9Q8TA86 221 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 FAM110DQ8TAY7 271 aaPredicted RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 DVL3Q92997 716 aaPredicted RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 PTP4A1Q93096 173 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ARHGEF26Q96DR7 871 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 CFAP57Q96MR6 1250 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ALG8Q9BVK2 526 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SSBP3Q9BWW4 388 aaPredicted RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 IFIH1Q9BYX4 1025 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 PDZD7Q9H5P4 517 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 RANGRFQ9HD47 186 aaPredicted RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SETD4Q9NVD3 440 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ADPRHL2Q9NX46 363 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ARHGEF38Q9NXL2 777 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 PLK2Q9NYY3 685 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 EHD3Q9NZN3 535 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 LRIT1Q9P2V4 623 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 DKK3Q9UBP4 350 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 AMACRQ9UHK6 382 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 TUBE1Q9UJT0 475 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 OSGIN1Q9UJX0 560 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 FZD4Q9ULV1 537 aa4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 ZFR2Q9UPR6 939 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 REXO2Q9Y3B8 237 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 SETD1AO15047 1707 aaKnown RBP4.07□□□□□ -1.76
SFSWAP-211ENST00000542813 C3P01024 1663 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 CEP170BQ9Y4F5 1589 aaPredicted RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 ZNF536O15090 1300 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 TCRBV21S2A2A0A5A6 115 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 ARHGEF37A1IGU5 675 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 GAGE12BA1L429 117 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 GAGE12HA6NDE8 117 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 DDX39AO00148 427 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 RNASET2O00584 256 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 PRYO14603 147 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 LAMTOR5O43504 91 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 HCRTR2O43614 444 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 MITFO75030 526 aaPredicted RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 AVILO75366 819 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 NCR1O76036 304 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 RECQL5O94762 991 aaPredicted RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 TJP3O95049 919 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 FYNP06241 537 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 HOXB5P09067 269 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 SLC2A4P14672 509 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 TRIM21P19474 475 aaKnown RBP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 EDN2P20800 178 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 SFPQP23246 707 aaKnown RBP eCLIP4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 HOXC8P31273 242 aa4.06□□□□□ -1.76
SFSWAP-211ENST00000542813 SKIV2L2P42285 1042 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms